Protein Concepts Dictionary

Tableau information

Concept source:  d1ny6b_  amino acid (a.a.) range (LYS145)(PHE209)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HEHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LYS145)  (ILE156) H1
	  (CYS161)  (GLY167) E2
	  (GLY172)  (SER184) H3
	  (SER184)  (GLU189) H4
	  (GLU189)  (ASN195) E5
	  (ASN195)  (PRO200) H6
	  (PHE204)  (PHE209) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
E2     -163.0°   E2                                        
H3      -38.2°  155.1°   H3                                 
H4       75.1°  -91.5°  -90.3°   H4                          
E5      126.7°  -40.8°  164.1°  -88.4°   E5                   
H6       76.9°  -86.4° -113.2°   49.5°   55.2°   H6            
H7      -52.7°  139.6°  -15.5°   90.7°  179.0°  123.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ny6b_ :   (LYS145)  (PHE209)   [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Transcriptional activator sigm54 (NtrC1), C-terminal domain |Aquifex aeolicus [TaxId: 63363]
 d1ny5a2 :   (SER143)  (GLY210)   [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Transcriptional activator sigm54 (NtrC1), C-terminal domain |Aquifex aeolicus [TaxId: 63363]
 d1ny6c_ :   (SER143)  (GLY210)   [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Transcriptional activator sigm54 (NtrC1), C-terminal domain |Aquifex aeolicus [TaxId: 63363]
 d3m0ea_ :   (SER143)  (LEU208)   [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |automated matches |Aquifex aeolicus [TaxId: 63363]
 d1ny6l_ :   (SER143)  (GLY210)   [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Transcriptional activator sigm54 (NtrC1), C-terminal domain |Aquifex aeolicus [TaxId: 63363]
 d1ny6h_ :   (LYS145)  (PHE209)   [view usage] : c.37.1.20 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Extended AAA-ATPase domain |Transcriptional activator sigm54 (NtrC1), C-terminal domain |Aquifex aeolicus [TaxId: 63363]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37