Tableau information
Concept source: d1z7ub_ amino acid (a.a.) range (LYS21)(LEU107)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: HEHHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS21) (LEU28) H1
(GLY31) (ASN35) E2
(ASN35) (ALA41) H3
(THR46) (GLY61) H4
(LEU62) (PHE68) E5
(PRO72) (THR78) E6
(THR80) (LEU107) H7
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 125.0° E2
H3 123.2° -88.6° H3
H4 -73.9° -136.5° 114.3° H4
E5 56.7° -68.8° -133.7° -109.5° E5
E6 -103.9° 130.3° 53.7° 60.7° 160.6° E6
H7 -109.4° 98.6° 13.9° 111.7° -129.3° -52.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1s3ja_ : (THR36) (THR124) [view usage] : a.4.5.28 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |MarR-like transcriptional regulators |Putative transcriptional regulator YusO |Bacillus subtilis [TaxId: 1423]
d1z7ua1 : (LYS21) (ARG106) [view usage] : a.4.5.69 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |HxlR-like |Hypothetical protein EF0647 |Enterococcus faecalis [TaxId: 1351]
d2b0lc_ : (SER182) (GLU254) [view usage] : a.4.5.66 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CodY HTH domain |GTP-sensing transcriptional pleiotropic repressor CodY, C-terminal domain |Bacillus subtilis [TaxId: 1423]
d1r7ja_ : (SER5) (LEU91) [view usage] : a.4.5.49 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Archaeal DNA-binding protein |Sso10a (SSO10449) |Sulfolobus solfataricus [TaxId: 2287]
d4a5nb_ : (GLY25) (GLU94) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d4a5ma_ : (GLY25) (GLU94) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d4a5nc_ : (LYS28) (GLU94) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d4hw0a_ : (THR10) (GLU97) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d1u2wb_ : (ASP41) (GLU117) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |Cadmium efflux system accessory protein CadC |Staphylococcus aureus [TaxId: 1280]
d1p4xa2 : (PHE158) (ALA240) [view usage] : a.4.5.28 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |MarR-like transcriptional regulators |Staphylococcal accessory regulator A homolog, SarS |Staphylococcus aureus [TaxId: 1280]
d1z7ub_ : (LYS21) (LEU107) [view usage] : a.4.5.69 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |HxlR-like |automated matches |Enterococcus faecalis [TaxId: 226185]
d4hw0b_ : (THR10) (ARG100) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d4a5na_ : (TRP27) (SER106) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d4hqma_ : (ASN20) (SER101) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
d3ctaa1 : (GLN6) (ILE86) [view usage] : a.4.5.28 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |MarR-like transcriptional regulators |Ta1064 (RFK), N-terminal domain |Thermoplasma acidophilum [TaxId: 2303]
d4hw0c_ : (GLY9) (ARG100) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d1jxsa_ : (SER7) (LYS94) [view usage] : a.4.5.14 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |Forkhead DNA-binding domain |Interleukin enhancer binding factor |Human (Homo sapiens) [TaxId: 9606]
d4a5mb_ : (GLY25) (GLU94) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d4gxob_ : (THR37) (GLU111) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Staphylococcus aureus [TaxId: 426430]
d1u2wc_ : (ASP41) (HIS114) [view usage] : a.4.5.5 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |ArsR-like transcriptional regulators |Cadmium efflux system accessory protein CadC |Staphylococcus aureus [TaxId: 1280]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.4