Tableau information
Concept source: d2j6xc_ amino acid (a.a.) range (PRO224)(SER297)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: HEHEHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO224) (GLY235) H1
(PRO237) (GLY242) E2
(GLU247) (GLY256) H3
(GLY259) (SER263) E4
(GLY275) (LEU280) H5
(PRO281) (ASN288) H6
(PRO292) (SER297) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 151.6° E2
H3 -38.9° 157.0° H3
E4 131.0° -20.7° 149.9° E4
H5 -78.6° 126.9° -63.5° 145.5° H5
H6 -63.4° 145.0° -36.2° 164.7° -29.1° H6
E7 121.8° -30.7° 139.4° -11.0° -156.6° 166.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2hsab_ : (SER210) (GLY320) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |automated matches |Solanum lycopersicum [TaxId: 4081]
d1pz3a2 : (THR186) (GLU294) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Alpha-L-arabinofuranosidase, catalytic domain |Bacillus stearothermophilus [TaxId: 1422]
d2bnja1 : (ASP151) (ILE235) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Thermoascus aurantiacus [TaxId: 5087]
d2ooda2 : (ARG113) (ILE203) [view usage] : c.1.9.9 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |SAH/MTA deaminase-like |Guanine deaminase |Bradyrhizobium japonicum [TaxId: 375]
d2w4le_ : (ALA85) (LYS158) [view usage] : c.97.1.0 |Cytidine deaminase-like |Cytidine deaminase-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2qapa_ : (ILE208) (ALA312) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Trypanosome (Leishmania mexicana) [TaxId: 5665]
d1kqya_ : (GLY167) (SER256) [view usage] : c.1.8.5 |TIM beta/alpha-barrel |(Trans)glycosidases |Type II chitinase |Hevamine A (chitinase/lysozyme) |Rubber tree (Hevea brasiliensis) [TaxId: 3981]
d3kcnb_ : (GLY38) (PRO109) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Rhodopirellula baltica [TaxId: 265606]
d4p5ua_ : (LEU139) (PRO205) [view usage] : c.1.9.12 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |TatD Mg-dependent DNase-like |automated matches |Escherichia coli [TaxId: 83333]
d1wkva1 : (SER125) (GLU199) [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |O-acetylserine sulfhydrylase (Cysteine synthase) |Aeropyrum pernix [TaxId: 56636]
d2bv9a1 : (THR127) (ILE228) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Endoglucanase H N-terminal domain |Clostridium thermocellum [TaxId: 1515]
d4b15a_ : (ASP170) (ASP257) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Tamarindus indica [TaxId: 58860]
d1q85a2 : (LEU152) (GLU232) [view usage] : c.1.26.1 |TIM beta/alpha-barrel |Homocysteine S-methyltransferase |Homocysteine S-methyltransferase |Cobalamin-dependent methionine synthase MetH, N-terminal domain |Thermotoga maritima [TaxId: 2336]
d1zkpd_ : (ILE159) (LEU235) [view usage] : d.157.1.9 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |YhfI-like |Hypothetical protein BA1088 (BAS1016) |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1h4pa_ : (LEU248) (ALA338) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Exo-beta-(1,3)-glucanase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3lg3a_ : (GLU271) (ILE351) [view usage] : c.1.12.7 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Phosphoenolpyruvate mutase/Isocitrate lyase-like |automated matches |Yersinia pestis [TaxId: 632]
d1rzma_ : (ARG107) (GLY184) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-arabino-heptulosonate-7-phosphate synthase (DAHP synthase, AroG) |Thermotoga maritima [TaxId: 2336]
d4lx4a_ : (TRP152) (ASP258) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Pseudomonas stutzeri [TaxId: 379731]
d3d5ha_ : (GLY165) (ASP254) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Scadoxus multiflorus [TaxId: 82246]
d3rjya_ : (GLU68) (ILE164) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Fervidobacterium nodosum [TaxId: 381764]
d1r8lb_ : (ASP175) (THR269) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-1,4-galactanase |Bacillus licheniformis [TaxId: 1402]
d1j0ca_ : (THR51) (GLU133) [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |1-aminocyclopropane-1-carboxylate deaminase |Yeast (Hansenula saturnus) [TaxId: 4906]
d1w3ha_ : (GLU158) (LEU251) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase A, catalytic core |Pseudomonas fluorescens [TaxId: 294]
d1zkpc_ : (ILE159) (LEU235) [view usage] : d.157.1.9 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |YhfI-like |Hypothetical protein BA1088 (BAS1016) |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d2x0sa1 : (GLU700) (ASN792) [view usage] : c.1.12.2 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Pyruvate phosphate dikinase, C-terminal domain |Pyruvate phosphate dikinase, C-terminal domain |Trypanosome (Trypanosoma brucei) [TaxId: 5691]
d1wkya2 : (ARG141) (TYR225) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-mannanase |Bacillus sp. JAMB-602 [TaxId: 244966]
d1nsja_ : (PRO65) (THR127) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |N-(5'phosphoribosyl)antranilate isomerase, PRAI |Thermotoga maritima [TaxId: 2336]
d2cyga1 : (VAL105) (ASN200) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Plant beta-glucanases |Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]
d2gfta_ : (ILE53) (GLY163) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Bacillus licheniformis [TaxId: 1402]
d2gfta_ : (ASP175) (VAL261) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Bacillus licheniformis [TaxId: 1402]
d2oofa2 : (SER115) (PHE214) [view usage] : c.1.9.17 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Imidazolonepropionase-like |Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 |Environmental samples
d4ooub_ : (TYR58) (LEU179) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Cryptopygus antarcticus [TaxId: 187623]
d1pz2a2 : (THR186) (GLU294) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Alpha-L-arabinofuranosidase, catalytic domain |Bacillus stearothermophilus [TaxId: 1422]
d1de5a_ : (THR202) (VAL295) [view usage] : c.1.15.2 |TIM beta/alpha-barrel |Xylose isomerase-like |L-rhamnose isomerase |L-rhamnose isomerase |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.79, d.157, c.23, c.97