Protein Concepts Dictionary

Tableau information

Concept source:  d4ilha_  amino acid (a.a.) range (ARG1904)(ASN1990)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	 (ARG1904) (LEU1924) H1
	 (LYS1931) (ARG1937) E2
	 (ARG1937) (MET1948) H3
	 (ASN1953) (PRO1958) E4
	 (PHE1965) (SER1970) H5
	 (ASP1972) (ALA1981) H6
	 (GLN1985) (ASN1990) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
E2      163.0°   E2                                        
H3      -50.1°  142.1°   H3                                 
E4      146.3°  -20.2° -162.3°   E4                          
H5       93.2°  -74.1°   99.7°  -76.2°   H5                   
H6      101.4°  -87.5°   54.9° -107.5°  -78.6°   H6            
E7      -65.6°  104.9° -112.9°   84.8°  100.9°  167.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3e66a1 :  (LEU1905) (ASN1990)   [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |Pre-mRNA-splicing factor 8, Prp8 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3e9oa1 :  (ARG1904) (ASN1990)   [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |Pre-mRNA-splicing factor 8, Prp8 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4jk9b_ :  (ALA1837) (ASN1918)   [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |Pre-mRNA-splicing factor 8, Prp8 |Human (Homo sapiens) [TaxId: 9606]
 d3sbta_ :  (ARG1904) (ASN1990)   [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
 d4ilja_ :  (LEU1905) (ASN1990)   [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |Pre-mRNA-splicing factor 8, Prp8 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
 d4jk8b_ :  (LYS1838) (ASN1918)   [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |Pre-mRNA-splicing factor 8, Prp8 |Human (Homo sapiens) [TaxId: 9606]
 d3e9la1 :  (LEU1833) (TYR1920)   [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |Pre-mRNA-splicing factor 8, Prp8 |Human (Homo sapiens) [TaxId: 9606]
 d4jkab_ :  (LYS1838) (ASN1918)   [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |Pre-mRNA-splicing factor 8, Prp8 |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55