Tableau information
Concept source: d1zq9a1 amino acid (a.a.) range (PRO42)(VAL111)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: HEHEHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO42) (ALA53) H1
(ASP58) (GLY64) E2
(GLY68) (ALA78) H3
(LYS79) (GLU85) E4
(PRO88) (GLN99) H5
(THR101) (LYS106) H6
(LYS106) (VAL111) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 138.7° E2
H3 -38.4° -175.3° H3
E4 122.0° -17.3° 158.6° E4
H5 -86.7° 134.7° -48.5° 150.8° H5
H6 45.3° -93.6° 83.0° -76.7° -131.5° H6
E7 106.6° -32.5° 143.6° -15.4° -165.0° -61.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.7° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1kiaa_ : (TYR44) (GLU114) [view usage] : c.66.1.5 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Glycine N-methyltransferase |Glycine N-methyltransferase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1sb8a_ : (SER3) (GLN76) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |UDP-N-acetylglucosamine 4-epimerase WbpP |Pseudomonas aeruginosa [TaxId: 287]
d2pkwa1 : (GLU76) (HIS151) [view usage] : c.66.1.55 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |YhiQ-like |Hypothetical protein YhiQ |Salmonella typhimurium [TaxId: 90371]
d1waba_ : (THR77) (ASP175) [view usage] : c.23.10.3 |Flavodoxin-like |SGNH hydrolase |Acetylhydrolase |Platelet-activating factor acetylhydrolase |Cow (Bos taurus), alpha1 [TaxId: 9913]
d1nvta1 : (ASP111) (GLY186) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Shikimate 5-dehydrogenase AroE |Methanococcus jannaschii [TaxId: 2190]
d2esrb_ : (VAL28) (LYS97) [view usage] : c.66.1.46 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |YhhF-like |Putative methyltransferase SPy1538 |Streptococcus pyogenes [TaxId: 1314]
d4pmja_ : (SER89) (LEU169) [view usage] : c.1.7.0 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |automated matches |automated matches |Rhizobium meliloti [TaxId: 266834]
d1bhja_ : (THR41) (GLU114) [view usage] : c.66.1.5 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Glycine N-methyltransferase |Glycine N-methyltransferase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1sfsa_ : (TYR74) (SER161) [view usage] : c.1.8.8 |TIM beta/alpha-barrel |(Trans)glycosidases |1,4-beta-N-acetylmuraminidase |Unnamed hypothetical protein |Bacillus stearothermophilus [TaxId: 1422]
d2ob1a_ : (PRO72) (ALA172) [view usage] : c.66.1.37 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Leucine carboxy methyltransferase Ppm1 |Leucine carboxy methyltransferase Ppm1 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4nqra_ : (SER238) (ALA303) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Anabaena variabilis [TaxId: 240292]
d4obba_ : (SER238) (ALA303) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Anabaena variabilis [TaxId: 240292]
d3l8ab_ : (GLN151) (SER231) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Streptococcus mutans [TaxId: 210007]
d1d2ga_ : (THR41) (GLU114) [view usage] : c.66.1.5 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Glycine N-methyltransferase |Glycine N-methyltransferase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1sb9a_ : (SER3) (GLN76) [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |UDP-N-acetylglucosamine 4-epimerase WbpP |Pseudomonas aeruginosa [TaxId: 287]
d1d2ha_ : (THR41) (GLU114) [view usage] : c.66.1.5 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Glycine N-methyltransferase |Glycine N-methyltransferase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2esra1 : (GLY30) (LYS97) [view usage] : c.66.1.46 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |YhhF-like |Putative methyltransferase SPy1538 |Streptococcus pyogenes [TaxId: 1314]
d1th8b_ : (VAL34) (ALA104) [view usage] : c.13.2.1 |SpoIIaa-like |SpoIIaa-like |Anti-sigma factor antagonist SpoIIaa |Anti-sigma factor antagonist SpoIIaa |Bacillus stearothermophilus [TaxId: 1422]
d1i1na_ : (HIS62) (VAL138) [view usage] : c.66.1.7 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Protein-L-isoaspartyl O-methyltransferase |Protein-L-isoaspartyl O-methyltransferase |Human (Homo sapiens) [TaxId: 9606]
d2cmga_ : (LYS52) (LYS130) [view usage] : c.66.1.0 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
d1kr5a_ : (HIS62) (VAL138) [view usage] : c.66.1.7 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Protein-L-isoaspartyl O-methyltransferase |Protein-L-isoaspartyl O-methyltransferase |Human (Homo sapiens) [TaxId: 9606]
d1jqdb_ : (LEU40) (LYS117) [view usage] : c.66.1.19 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Histamine methyltransferase |Histamine methyltransferase |Human (Homo sapiens) [TaxId: 9606]
d1jqea_ : (LEU40) (LYS117) [view usage] : c.66.1.19 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Histamine methyltransferase |Histamine methyltransferase |Human (Homo sapiens) [TaxId: 9606]
d1zq9a1 : (PRO42) (VAL111) [view usage] : c.66.1.24 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |rRNA adenine dimethylase-like |Probable dimethyladenosine transferase |Human (Homo sapiens) [TaxId: 9606]
d2pjra1 : (ASN13) (THR91) [view usage] : c.37.1.19 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Tandem AAA-ATPase domain |DEXX box DNA helicase |Bacillus stearothermophilus, PcrA [TaxId: 1422]
d4ifkb_ : (LEU126) (LEU237) [view usage] : c.1.9.15 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |PP1699/LP2961-like |2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD |Pseudomonas fluorescens [TaxId: 294]
d1r18a_ : (PRO62) (GLU145) [view usage] : c.66.1.7 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Protein-L-isoaspartyl O-methyltransferase |Protein-L-isoaspartyl O-methyltransferase |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3l8aa_ : (GLN151) (SER231) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Streptococcus mutans [TaxId: 210007]
d1nbia_ : (TYR44) (GLU114) [view usage] : c.66.1.5 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Glycine N-methyltransferase |Glycine N-methyltransferase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d9ruba1 : (LYS174) (ASP263) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Rhodospirillum rubrum [TaxId: 1085]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.67, c.2, c.66, c.93, c.23, c.37, c.13