Protein Concepts Dictionary

Tableau information

Concept source:  d4bkua_  amino acid (a.a.) range (ALA121)(ASP248)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA121)  (ALA131) H1
	  (ASP138)  (LEU144) E2
	  (TYR156)  (SER176) H3
	  (GLY181)  (PRO191) E4
	  (PHE203)  (SER212) H5
	  (THR221)  (SER234) H6
	  (ALA242)  (ASP248) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
E2      163.2°   E2                                        
H3      -26.2° -170.2°   H3                                 
E4      152.7°  -22.4° -158.5°   E4                          
H5      -81.9°  111.8°  -63.1°  -96.8°   H5                   
H6      -37.2°  152.3°   22.2°  168.5°   77.3°   H6            
E7      129.4°  -46.7°  136.7°  -24.7°  -84.4°  158.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.9°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4nr0a_ :   (GLY133)  (ASP251)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Pseudomonas aeruginosa [TaxId: 208964]
 d3un1a_ :    (THR92)  (ASP228)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
 d4bkua_ :   (ALA121)  (ASP248)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |automated matches |Burkholderia pseudomallei [TaxId: 884204]
 d3osua_ :   (THR125)  (ASN241)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Staphylococcus aureus [TaxId: 158878]
 d3rj5a_ :   (ASP123)  (ASP237)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Drosophila alcohol dehydrogenase |Fly (Drosophila lebanonensis) [TaxId: 7225]
 d1d7oa_ :   (PHE173)  (ASP292)   [view usage] : c.2.1.2 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Tyrosine-dependent oxidoreductases |Enoyl-ACP reductase |Oil seed rape (Brassica napus) [TaxId: 3708]
 d3un1d_ :    (THR92)  (ASP228)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
 d2wk5a2 :   (PRO105)  (VAL185)   [view usage] : c.27.1.1 |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4onea_ :   (LEU114)  (ASP246)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Brucella melitensis [TaxId: 224914]
 d4txea_ :   (TYR164)  (LEU246)   [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4fn4a_ :   (PRO130)  (ASP249)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Sulfolobus acidocaldarius [TaxId: 330779]
 d3un1b_ :   (ALA115)  (ASP228)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
 d4jroa_ :   (ARG127)  (ASP242)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Listeria monocytogenes [TaxId: 169963]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1,     c.2,    c.27