Protein Concepts Dictionary

Tableau information

Concept source:  d3zk8a_  amino acid (a.a.) range (LYS166)(ASN270)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LYS166)  (ILE194) H1
	  (LYS199)  (SER204) E2
	  (PHE208)  (ALA214) H3
	  (GLY216)  (ILE222) E4
	  (THR232)  (THR246) H5
	  (PRO249)  (GLU254) E6
	  (ARG260)  (ASN270) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
E2      109.6°   E2                                        
H3      -73.4°  176.8°   H3                                 
E4       82.7°  -26.9° -156.0°   E4                          
H5      -62.1° -166.2°   16.7° -143.2°   H5                   
E6     -150.4°  -41.0°  135.9°  -67.8°  147.1°   E6            
H7       22.1°  131.5°  -51.6°  104.7°  -40.1° -172.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3zk8a_ :   (LYS166)  (ASN270)   [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d3zk7a_ :   (LYS166)  (ASN270)   [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d4oxra_ :   (ASP187)  (GLY268)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Staphylococcus pseudintermedius [TaxId: 283734]
 d2ov1a_ :   (ASN205)  (GLY306)   [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |automated matches |Synechocystis sp. [TaxId: 1143]
 d4k3vb_ :   (ASP173)  (GLU252)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Staphylococcus aureus [TaxId: 869816]
 d1psza_ :   (LYS166)  (THR269)   [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |Pneumococcal surface antigen PssA |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d1t6t1_ :     (ASN7)   (GLY90)   [view usage] : c.136.1.1 |Toprim domain |Toprim domain |Toprim domain |Hypothetical protein aq_2086 |Aquifex aeolicus [TaxId: 63363]
 d1xvla1 :   (ASN180)  (THR284)   [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |Mn transporter MntC |Synechocystis sp. PCC 6803 [TaxId: 1148]
 d1xvlb_ :   (ALA181)  (THR284)   [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |Mn transporter MntC |Synechocystis sp. PCC 6803 [TaxId: 1148]
 d3zk9a_ :   (LYS166)  (THR269)   [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d3hh8a_ :   (SER189)  (ASP268)   [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |automated matches |Streptococcus pyogenes [TaxId: 301447]
 d3ujpc_ :   (ALA181)  (THR284)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]
 d3ujpa_ :   (ALA181)  (GLY285)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Synechocystis sp. [TaxId: 1148]
 d4utpa_ :   (LYS166)  (ASP268)   [view usage] : c.92.2.2 |Chelatase-like |"Helical backbone" metal receptor |TroA-like |automated matches |Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
 d4h0fa_ :   (TYR190)  (THR270)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Streptococcus agalactiae [TaxId: 208435]
 d3mfqa_ :   (ALA158)  (ALA263)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Streptococcus suis [TaxId: 391295]
 d4nnoa_ :   (ASP190)  (GLU269)   [view usage] : c.92.2.0 |Chelatase-like |"Helical backbone" metal receptor |automated matches |automated matches |Staphylococcus aureus [TaxId: 158878]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.92,   c.136