Tableau information
Concept source: d2qvca_ amino acid (a.a.) range (GLY196)(LYS284)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: HEHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY196) (HIS210) H1
(ASP214) (TYR220) E2
(TYR220) (GLY235) H3
(VAL240) (CYS244) E4
(PRO249) (GLY258) H5
(GLN261) (ARG267) E6
(ARG267) (LYS284) H7
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 161.5° E2
H3 -48.1° 149.3° H3
E4 147.5° -18.4° -162.5° E4
H5 -33.3° -156.3° 40.9° -141.9° H5
E6 153.5° -10.0° -158.5° 8.8° -150.3° E6
H7 134.7° -27.0° -172.8° 18.5° 146.0° 19.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2qvca_ : (GLY196) (LYS284) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d3c6qa_ : (ASP165) (GLY256) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Thermotoga maritima [TaxId: 243274]
d1glga_ : (MET192) (GLY275) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Galactose/glucose-binding protein |Escherichia coli [TaxId: 562]
d2h3ha_ : (ASP165) (LYS254) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d4joqa_ : (ASP200) (LEU287) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Rhodobacter sphaeroides [TaxId: 349102]
d4pz0a_ : (ALA202) (GLY292) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |automated matches |Bacillus anthracis [TaxId: 198094]
d1zhha_ : (THR240) (ASP329) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Quorum-sensing signal (autoinducer-2) binding protein LuxP |Vibrio harveyi [TaxId: 669]
d2h3hb_ : (ASP165) (LYS254) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Thermotoga maritima [TaxId: 2336]
d2ipla_ : (THR185) (GLY275) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Galactose/glucose-binding protein |Escherichia coli [TaxId: 562]
d4wuta_ : (GLN194) (LYS284) [view usage] : c.93.1.0 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |automated matches |automated matches |Agrobacterium vitis [TaxId: 311402]
d2fvya_ : (THR185) (GLY275) [view usage] : c.93.1.1 |Periplasmic binding protein-like I |Periplasmic binding protein-like I |L-arabinose binding protein-like |Galactose/glucose-binding protein |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.93