Tableau information
Concept source: d1uada_ amino acid (a.a.) range (ALA76)(ASP182)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: HEHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA76) (GLY86) H1
(GLY88) (SER94) E2
(MET98) (GLU116) H3
(VAL120) (GLY126) E4
(SER138) (ASN150) H5
(VAL151) (GLU155) E6
(ASN163) (ASP182) H7
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 127.8° E2
H3 -67.2° 164.3° H3
E4 113.2° -17.4° 174.8° E4
H5 -70.4° 157.4° -9.9° 174.5° H5
E6 101.2° -42.9° 147.0° -28.1° 157.0° E6
H7 -70.6° 151.7° -18.3° 166.8° -8.7° 165.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±13.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1udxa2 : (LEU227) (THR326) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Obg GTP-binding protein middle domain |Thermus thermophilus [TaxId: 274]
d3bc1a_ : (ARG82) (SER188) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d3nhza_ : (ALA41) (LEU120) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1u0ea_ : (GLY188) (LEU281) [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Mouse (Mus musculus) [TaxId: 10090]
d1qcza_ : (SER57) (LEU137) [view usage] : c.23.8.1 |Flavodoxin-like |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |Escherichia coli [TaxId: 562]
d3f1lb_ : (LYS6) (ALA87) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4lyja_ : (SER65) (LYS167) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2hdoa1 : (PRO140) (PHE207) [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |Phosphoglycolate phosphatase |Lactobacillus plantarum [TaxId: 1590]
d1e0sa_ : (GLN67) (ASN172) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |ADP-ribosylation factor |Human (Homo sapiens), ARF6 [TaxId: 9606]
d1c1db1 : (ALA150) (THR230) [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Phenylalanine dehydrogenase |Rhodococcus sp., M4 [TaxId: 1831]
d2v3ga_ : (THR127) (ARG244) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Clostridium thermocellum [TaxId: 1515]
d3nhzb_ : (ALA41) (LEU120) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d2hszb_ : (ALA155) (GLN224) [view usage] : c.108.1.6 |HAD-like |HAD-like |beta-Phosphoglucomutase-like |automated matches |Haemophilus somnus [TaxId: 205914]
d2wnqc_ : (ALA70) (GLY144) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Escherichia coli [TaxId: 562]
d2atea_ : (SER57) (ALA138) [view usage] : c.23.8.1 |Flavodoxin-like |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |Escherichia coli [TaxId: 562]
d3s6jf_ : (ASP252) (HIS319) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Pseudomonas syringae [TaxId: 323]
d4nyir_ : (ARG68) (GLN165) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |cH-p21 Ras protein |Human (Homo sapiens) [TaxId: 9606]
d1ex1a2 : (ALA469) (LEU557) [view usage] : c.23.11.1 |Flavodoxin-like |Beta-D-glucan exohydrolase, C-terminal domain-like |Beta-D-glucan exohydrolase, C-terminal domain-like |Beta-D-glucan exohydrolase, C-terminal domain |Barley (Hordeum vulgare) [TaxId: 4513]
d1u8yb_ : (ASP80) (ARG178) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ras-related protein RalA |Cotton-top tamarin (Saguinus oedipus) [TaxId: 9490]
d4esoa_ : (GLY3) (THR78) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d1k5da_ : (ASP77) (LEU168) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Human (Homo sapiens) [TaxId: 9606]
d1xmpb_ : (THR52) (GLY133) [view usage] : c.23.8.1 |Flavodoxin-like |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1yhna_ : (ALA76) (GLU177) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab7 |Human (Homo sapiens) [TaxId: 9606]
d1mbza1 : (PRO218) (ALA307) [view usage] : c.26.2.1 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |N-type ATP pyrophosphatases |beta-Lactam synthetase |Streptomyces clavuligerus [TaxId: 1901]
d1z06a1 : (MET99) (ALA196) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab-33b |Mouse (Mus musculus) [TaxId: 10090]
d3nhzc_ : (ALA41) (LEU120) [view usage] : c.23.1.0 |Flavodoxin-like |CheY-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d1ni5a1 : (SER0) (LEU105) [view usage] : c.26.2.5 |Adenine nucleotide alpha hydrolase-like |Adenine nucleotide alpha hydrolases-like |PP-loop ATPase |tRNA-Ile-lysidine synthetase, TilS, N-terminal domain |Escherichia coli [TaxId: 562]
d1e1da_ : (ASP480) (GLY552) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio vulgaris [TaxId: 881]
d4muma1 : (ASP164) (SER230) [view usage] : c.108.1.8 |HAD-like |HAD-like |5'(3')-deoxyribonucleotidase (dNT-2) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1gnta_ : (ASP480) (GLY552) [view usage] : e.26.1.1 |Prismane protein-like |Prismane protein-like |Hybrid cluster protein (prismane protein) |Hybrid cluster protein (prismane protein) |Desulfovibrio vulgaris [TaxId: 881]
d3qypb_ : (GLU151) (SER218) [view usage] : c.108.1.0 |HAD-like |HAD-like |automated matches |automated matches |Bacteroides thetaiotaomicron [TaxId: 818]
d1xcja_ : (THR46) (LEU123) [view usage] : c.66.1.16 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Guanidinoacetate methyltransferase |Guanidinoacetate methyltransferase |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2nsja_ : (SER57) (LEU137) [view usage] : c.23.8.1 |Flavodoxin-like |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) |Escherichia coli [TaxId: 562]
d1fzqa_ : (GLN71) (ASN176) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |ADP-ribosylation factor |Mouse (Mus musculus), ARL3 [TaxId: 10090]
d2wt9b_ : (LEU137) (ASN212) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Acinetobacter baumannii [TaxId: 509173]
d1xtra_ : (PRO71) (GLU171) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2wtaa_ : (LEU137) (CYS214) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Acinetobacter baumannii [TaxId: 509173]
d3cbqa_ : (GLY178) (LEU279) [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2wt9a_ : (LEU137) (LEU211) [view usage] : c.33.1.0 |Isochorismatase-like hydrolases |Isochorismatase-like hydrolases |automated matches |automated matches |Acinetobacter baumannii [TaxId: 509173]
d3hbja_ : (GLN337) (SER413) [view usage] : c.87.1.0 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |automated matches |automated matches |Medicago truncatula [TaxId: 3880]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.2, c.108, c.26, c.66, c.80, c.23, c.37, c.87, c.33, e.26