Protein Concepts Dictionary

Tableau information

Concept source:  d4powa_  amino acid (a.a.) range (PRO100)(PRO179)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO100)  (ILE106) H1
	  (TYR112)  (THR122) E2
	  (THR122)  (THR130) H3
	  (GLU135)  (ASP140) E4
	  (THR143)  (PHE157) H5
	  (VAL160)  (GLN165) E6
	  (THR168)  (PRO179) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
E2      131.8°   E2                                        
H3     -108.4°  104.3°   H3                                 
E4      -41.3°  124.6°   73.0°   E4                          
H5      -96.8°   40.0°  142.6° -114.4°   H5                   
E6      -21.2°  142.3° -110.9°  -57.4° -102.6°   E6            
H7      128.3°  -61.2°   45.2°   87.9°  -97.4° -144.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4p0ib_ :   (PRO100)  (PRO179)   [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
 d4p0ia_ :   (PRO100)  (PRO179)   [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
 d4poxb_ :    (GLN99)  (PRO179)   [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
 d4pp0b_ :    (GLN99)  (PRO179)   [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
 d4powa_ :   (PRO100)  (PRO179)   [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
 d4poxa_ :    (GLN99)  (PRO179)   [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.94