Protein Concepts Dictionary

Tableau information

Concept source:  d4em6a_  amino acid (a.a.) range (LEU116)(GLY230)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU116)  (SER135) H1
	  (THR147)  (GLY153) E2
	  (ILE154)  (LEU168) H3
	  (ARG176)  (SER181) E4
	  (GLY185)  (LEU195) H5
	  (THR200)  (SER206) E6
	  (ILE212)  (GLY230) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
E2      143.2°   E2                                        
H3      -57.0° -143.8°   H3                                 
E4      126.3°  -18.1° -152.6°   E4                          
H5       44.9° -170.0°   40.9° -163.8°   H5                   
E6     -161.1°  -17.9°  134.7°  -35.5°  153.9°   E6            
H7       34.5° -150.7°   65.3°  135.4°  -28.5° -154.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4em6c_ :   (LEU116)  (VAL225)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Brucella melitensis [TaxId: 224914]
 d2o2da_ :   (VAL166)  (LEU278)   [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Trypanosoma brucei [TaxId: 5702]
 d1dqra_ :   (MET118)  (PHE228)   [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d2wu8a_ :   (VAL118)  (LEU233)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d3nbub_ :   (MET117)  (ALA230)   [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |automated matches |Escherichia coli [TaxId: 668369]
 d1q50a_ :   (VAL165)  (GLY284)   [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Trypanosome (Leishmania mexicana) [TaxId: 5665]
 d4em6a_ :   (LEU116)  (GLY230)   [view usage] : c.80.1.0 |SIS domain |SIS domain |automated matches |automated matches |Brucella melitensis [TaxId: 224914]
 d1t10a_ :   (ASP164)  (SER271)   [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Trypanosome (Leishmania mexicana) [TaxId: 5665]
 d3ff1a_ :    (LYS56)  (GLU159)   [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |automated matches |Staphylococcus aureus [TaxId: 93062]
 d2o2db_ :   (ASP165)  (GLY285)   [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Trypanosoma brucei [TaxId: 5702]
 d2o2cc_ :   (MET167)  (LEU278)   [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Trypanosoma brucei [TaxId: 5702]
 d2o2ca_ :   (MET167)  (LEU278)   [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Trypanosoma brucei [TaxId: 5702]
 d1nuha_ :   (MET118)  (ALA232)   [view usage] : c.80.1.2 |SIS domain |SIS domain |Phosphoglucose isomerase, PGI |Phosphoglucose isomerase, PGI |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.80