Tableau information
Concept source: d3d5tc1 amino acid (a.a.) range (GLN48)(ALA145)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: HEHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLN48) (ASP60) H1
(ALA67) (ASP73) E2
(ASP74) (LYS80) H3
(ASP83) (LEU87) E4
(GLU98) (GLU119) H5
(LYS126) (VAL130) E6
(ALA134) (ALA145) H7
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 169.2° E2
H3 21.3° -164.2° H3
E4 127.8° -41.5° 137.7° E4
H5 -64.1° 125.8° -58.1° 163.2° H5
E6 112.6° -56.6° 126.5° -17.0° 158.9° E6
H7 -100.1° 90.5° -88.6° 132.0° -37.1° 144.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±10.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1u7pc_ : (GLU73) (GLY163) [view usage] : c.108.1.17 |HAD-like |HAD-like |Magnesium-dependent phosphatase-1, Mdp1 |Magnesium-dependent phosphatase-1, Mdp1 |Mouse (Mus musculus) [TaxId: 10090]
d4jbeb_ : (GLU305) (GLY373) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Saccharomonospora viridis [TaxId: 471857]
d1u7pa_ : (GLU73) (GLY163) [view usage] : c.108.1.17 |HAD-like |HAD-like |Magnesium-dependent phosphatase-1, Mdp1 |Magnesium-dependent phosphatase-1, Mdp1 |Mouse (Mus musculus) [TaxId: 10090]
d4jyba_ : (THR128) (LEU226) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Metallochaperone MeaB |Methylobacterium extorquens [TaxId: 408]
d4jbea_ : (GLU305) (GLY373) [view usage] : c.82.1.0 |ALDH-like |ALDH-like |automated matches |automated matches |Saccharomonospora viridis [TaxId: 471857]
d4h7pb1 : (LEU46) (ALA143) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Leishmania major [TaxId: 347515]
d1u7pd_ : (GLU73) (ALA162) [view usage] : c.108.1.17 |HAD-like |HAD-like |Magnesium-dependent phosphatase-1, Mdp1 |Magnesium-dependent phosphatase-1, Mdp1 |Mouse (Mus musculus) [TaxId: 10090]
d1c3ra_ : (ALA197) (GLY315) [view usage] : c.42.1.2 |Arginase/deacetylase |Arginase/deacetylase |Histone deacetylase, HDAC |HDAC homologue |Aquifex aeolicus [TaxId: 63363]
d5ldha1 : (MET63) (GLY154) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Lactate dehydrogenase |Pig (Sus scrofa) [TaxId: 9823]
d1b8pa1 : (GLU47) (THR138) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Malate dehydrogenase |Aquaspirillum arcticum [TaxId: 87645]
d1bdmb1 : (ILE42) (ALA143) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Malate dehydrogenase |Thermus flavus [TaxId: 274]
d1s1ma2 : (GLN114) (VAL230) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |CTP synthase PyrG, N-terminal domain |Escherichia coli [TaxId: 562]
d4h7pa1 : (LEU46) (ALA143) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Leishmania major [TaxId: 347515]
d1fp4b_ : (LYS400) (ARG476) [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, beta chain |Azotobacter vinelandii [TaxId: 354]
d1wzea1 : (SER45) (PRO144) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Malate dehydrogenase |Thermus thermophilus [TaxId: 274]
d2x2ya1 : (SER189) (ASP310) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Cellulomonas fimi [TaxId: 1708]
d2bvta2 : (SER189) (ASP310) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Mannanase A, ManA |Cellulomonas fimi [TaxId: 1708]
d1iz9a1 : (ALA46) (ALA144) [view usage] : c.2.1.5 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |LDH N-terminal domain-like |Malate dehydrogenase |Thermus thermophilus [TaxId: 274]
d1f0ka_ : (SER223) (ALA293) [view usage] : c.87.1.2 |UDP-Glycosyltransferase/glycogen phosphorylase |UDP-Glycosyltransferase/glycogen phosphorylase |Peptidoglycan biosynthesis glycosyltransferase MurG |Peptidoglycan biosynthesis glycosyltransferase MurG |Escherichia coli [TaxId: 562]
d3d5tc1 : (GLN48) (ALA145) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d3f46a1 : (HIS123) (GLY191) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |5,10-methenyltetrahydromethanopterin hydrogenase, HMD |Methanocaldococcus jannaschii [TaxId: 2190]
d2b0ja2 : (HIS123) (GLY191) [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |5,10-methenyltetrahydromethanopterin hydrogenase, HMD |Methanocaldococcus jannaschii [TaxId: 2190]
d1g8aa_ : (LEU114) (ASP184) [view usage] : c.66.1.3 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |Fibrillarin homologue |Fibrillarin homologue |Pyrococcus horikoshii [TaxId: 53953]
d1u7pb_ : (GLU73) (GLY163) [view usage] : c.108.1.17 |HAD-like |HAD-like |Magnesium-dependent phosphatase-1, Mdp1 |Magnesium-dependent phosphatase-1, Mdp1 |Mouse (Mus musculus) [TaxId: 10090]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.2, c.108, c.82, c.92, c.66, c.42, c.37, c.87