Tableau information
Concept source: d4kcda_ amino acid (a.a.) range (ALA203)(TRP286)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: HEHEEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ALA203) (ASN213) H1
(ASP219) (MET223) E2
(ASP224) (ILE234) H3
(LYS239) (LYS245) E4
(ILE249) (ILE254) E5
(THR263) (SER275) H6
(PHE278) (TRP286) H7
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -153.1° E2
H3 -46.2° 125.3° H3
E4 109.8° -65.3° -149.5° E4
E5 -136.1° 51.6° -90.4° -113.2° E5
H6 -39.1° -114.5° 46.4° -103.3° 119.6° H6
H7 -43.9° 155.1° -44.4° 137.0° 103.5° -75.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2rc9b_ : (PRO205) (LYS288) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4kr5a_ : (ALA399) (GLU481) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Lactococcus lactis [TaxId: 272623]
d4kcdb_ : (PRO205) (TRP286) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4r6ka_ : (ASP239) (GLN316) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Bacillus subtilis [TaxId: 224308]
d2f36a_ : (SER173) (ARG252) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4kcda_ : (ALA203) (TRP286) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2i0bb_ : (ASN174) (ARG253) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2thia_ : (ARG224) (ARG304) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Thiaminase I |Paenibacillus thiaminolyticus [TaxId: 49283]
d4kd5a_ : (VAL187) (GLY265) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d4jwxa_ : (VAL197) (LEU278) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2y7kd_ : (ILE232) (SER299) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Burkholderia sp. [TaxId: 233098]
d1xvya_ : (GLY174) (THR260) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Serratia marcescens, SfuA [TaxId: 615]
d2qs4a_ : (SER173) (ARG252) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4kd5b_ : (VAL187) (GLY265) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d2f34a_ : (ASN172) (ARG252) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2h5yb_ : (SER151) (GLY229) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 190486]
d3fuza_ : (SER706) (ARG785) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d1wvja_ : (THR173) (GLY259) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Glutamate receptor ligand binding core |Norway rat (Rattus norvegicus), GluR2 [TaxId: 10116]
d4io4b_ : (SER161) (GLN243) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Adineta vaga [TaxId: 104782]
d4g4pa_ : (ALA162) (ALA244) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Enterococcus faecalis [TaxId: 226185]
d3od7a_ : (LYS174) (ARG262) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Ferric-binding protein FbpA |Haemophilus influenzae [TaxId: 727]
d4mh5a_ : (ASN174) (TRP251) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2xxwa_ : (ASN721) (ARG800) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d4kd5d_ : (VAL187) (GLU263) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d3zsfa_ : (LEU184) (GLY269) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Neisseria gonorrhoeae [TaxId: 485]
d2zyka_ : (LYS229) (GLU315) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Thermoactinomyces vulgaris [TaxId: 2026]
d2znsa_ : (SER706) (ASN787) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3zsff_ : (LEU184) (PHE267) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Neisseria gonorrhoeae [TaxId: 485]
d2h5ya_ : (SER151) (GLY229) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Xanthomonas axonopodis [TaxId: 190486]
d3u92a_ : (ASN171) (TRP249) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94