Protein Concepts Dictionary

Tableau information

Concept source:  d3h3jb2  amino acid (a.a.) range (LEU151)(ASN250)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HEEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU151)  (ALA163) H1
	  (VAL171)  (GLY177) E2
	  (THR182)  (VAL186) E3
	  (LEU197)  (GLN203) H4
	  (GLY207)  (ARG219) H5
	  (ASP220)  (ALA228) H6
	  (TYR234)  (ASN250) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
E2      141.2°   E2                                        
E3      -53.8°  149.5°   E3                                 
H4       41.8° -101.7°  -94.8°   H4                          
H5      146.3°  -61.5°  123.6°  130.5°   H5                   
H6       85.3°  -94.0°  115.7°   70.5°  -65.3°   H6            
H7      111.4°  -99.7°   57.6°  150.9°  -77.4° -127.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1guza2 :   (ALA143)  (ASP242)   [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Chlorobium vibrioforme [TaxId: 1098]
 d4bgva2 :   (GLY151)  (VAL247)   [view usage] : d.162.1.0 |LDH C-terminal domain-like |LDH C-terminal domain-like |automated matches |automated matches |Picrophilus torridus [TaxId: 82076]
 d1gv0a2 :   (ALA143)  (ASP242)   [view usage] : d.162.1.1 |LDH C-terminal domain-like |LDH C-terminal domain-like |Lactate & malate dehydrogenases, C-terminal domain |Malate dehydrogenase |Chlorobium tepidum [TaxId: 1097]
 d3h3ja2 :   (LEU151)  (ASN250)   [view usage] : d.162.1.0 |LDH C-terminal domain-like |LDH C-terminal domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
 d3h3jb2 :   (LEU151)  (ASN250)   [view usage] : d.162.1.0 |LDH C-terminal domain-like |LDH C-terminal domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
 d4lmra2 :   (THR148)  (ASP250)   [view usage] : d.162.1.0 |LDH C-terminal domain-like |LDH C-terminal domain-like |automated matches |automated matches |Bacillus cereus [TaxId: 226900]
 d3d0ob2 :   (LEU151)  (ASN250)   [view usage] : d.162.1.0 |LDH C-terminal domain-like |LDH C-terminal domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
 d3d0oa2 :   (LEU151)  (ASN250)   [view usage] : d.162.1.0 |LDH C-terminal domain-like |LDH C-terminal domain-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93062]
 d3pqdb2 :   (THR148)  (ASN250)   [view usage] : d.162.1.0 |LDH C-terminal domain-like |LDH C-terminal domain-like |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.162