Protein Concepts Dictionary

Tableau information

Concept source:  d4juhd_  amino acid (a.a.) range (ALA505)(GLY655)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HEEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA505)  (GLU511) H1
	  (TYR522)  (ASN528) E2
	  (GLY533)  (ASP537) E3
	  (ASP537)  (MET559) H4
	  (ARG575)  (LEU626) H5
	  (LEU626)  (LYS631) H6
	  (ASP645)  (GLY655) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
E2       19.9°   E2                                        
E3      150.1°  145.2°   E3                                 
H4     -148.8° -163.8°  -51.0°   H4                          
H5       37.1°  -24.8°  120.5°  171.1°   H5                   
H6      -44.6°   59.6° -149.7° -105.4°   81.5°   H6            
H7      148.1°  159.6°  -24.4°   33.8°  137.4° -125.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ru7b_ :   (ALA505)  (GLY655)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
 d1ruyi_ :   (ALA505)  (GLY655)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
 d4gxxb_ :     (ALA5)  (ASN154)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
 d4jugf_ :   (ALA505)  (GLY655)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
 d1ru7f_ :   (ALA505)  (GLY655)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
 d3m6sh_ :     (ALA5)  (GLY155)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
 d4jugd_ :   (ALA505)  (ARG653)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
 d4jugj_ :   (ALA505)  (ASN654)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]
 d4juhd_ :   (ALA505)  (GLY655)   [view usage] : h.3.1.1 |Stalk segment of viral fusion proteins |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza hemagglutinin (stalk) |Influenza A virus, different strains [TaxId: 11320]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   h.3