Tableau information
Concept source: d3dp8a_ amino acid (a.a.) range (PRO225)(THR292)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: HEEHHHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO225) (ASN235) H1
(TYR238) (SER243) E2
(ILE246) (ALA256) E3
(ALA258) (LEU263) H4
(LEU263) (TYR271) H5
(ASN274) (TYR284) H6
(THR286) (THR292) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -118.4° E2
E3 -172.9° -55.2° E3
H4 -66.4° -54.5° -106.5° H4
H5 -37.4° -141.9° 145.1° -89.1° H5
H6 -62.7° 151.8° 124.4° -127.0° 57.9° H6
E7 131.4° 13.6° -42.5° -68.0° -153.6° 147.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3mvwb_ : (LEU226) (THR292) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
d3o9pa_ : (TYR251) (TRP313) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Escherichia coli [TaxId: 562]
d3dp8a_ : (PRO225) (THR292) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
d1zlqb_ : (PRO225) (THR292) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
d4oeta_ : (ASP218) (HIS285) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d3qima_ : (LEU226) (THR292) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
d3dp8c_ : (LEU226) (THR292) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
d3mvxa_ : (LEU226) (THR292) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Nickel-binding periplasmic protein NikA |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94