Tableau information
Concept source: d4mx6a_ amino acid (a.a.) range (LYS228)(LYS316)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: HEEHHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LYS228) (GLN233) H1
(SER234) (GLU238) E2
(HIS241) (SER251) E3
(SER251) (SER257) H4
(PRO259) (SER295) H5
(GLN299) (LEU303) E6
(SER304) (LYS316) H7
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 119.1° E2
E3 142.7° -83.3° E3
H4 -165.0° -64.2° 49.7° H4
H5 -36.0° -119.1° 155.8° 128.9° H5
E6 90.2° -31.4° -100.4° -95.3° -103.8° E6
H7 97.1° -84.8° -52.8° -97.8° 132.6° -75.1°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4nhbb_ : (LEU214) (SER310) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Desulfovibrio desulfuricans [TaxId: 525146]
d4mija_ : (LYS223) (LYS312) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |TRAP dicarboxylate transporter |Polaromonas [TaxId: 296591]
d4o7md_ : (LYS225) (PHE319) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Shewanella loihica [TaxId: 323850]
d4nn3a_ : (LYS221) (GLY320) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Desulfovibrio salexigens [TaxId: 526222]
d4o7mb_ : (LYS225) (GLN318) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Shewanella loihica [TaxId: 323850]
d4mx6a_ : (LYS228) (LYS316) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Shewanella oneidensis [TaxId: 211586]
d4o7mc_ : (LYS225) (LYS313) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Shewanella loihica [TaxId: 323850]
d4p47a_ : (LYS222) (VAL308) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Ochrobactrum anthropi [TaxId: 439375]
d4o7ma_ : (LYS225) (PHE319) [view usage] : c.94.1.0 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |automated matches |automated matches |Shewanella loihica [TaxId: 323850]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94