Tableau information
Concept source: d4i02c2 amino acid (a.a.) range (ASP139)(GLY208)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: HEEHHEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP139) (GLN154) H1
(ASP156) (PRO161) E2
(GLY163) (LYS167) E3
(THR169) (GLY178) H4
(ARG181) (ASN195) H5
(ILE197) (GLY201) E6
(LYS202) (GLY208) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -94.4° E2
E3 94.1° 141.6° E3
H4 112.8° -109.8° 101.1° H4
H5 -76.2° -23.6° -156.0° 102.9° H5
E6 75.4° 118.9° -30.0° 129.9° -126.4° E6
E7 -90.6° -57.4° 159.6° -58.9° 44.1° 165.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2fmya2 : (ASP139) (ASP210) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Carboxydothermus hydrogenoformans [TaxId: 129958]
d1lb2a1 : (ASP138) (GLY207) [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Catabolite gene activator protein (CAP), C-terminal domain |Escherichia coli [TaxId: 562]
d3fweb2 : (LEU138) (TYR206) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4i02c2 : (ASP139) (GLY208) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3d0sa2 : (VAL146) (ASP215) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
d4i0bb2 : (VAL140) (TYR207) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2oz6a1 : (VAL144) (PHE211) [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Cyclic AMP receptor-like protein Vfr |Pseudomonas aeruginosa [TaxId: 287]
d4i01a2 : (ASP139) (TYR207) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4n9ha2 : (ASP138) (TYR206) [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Catabolite gene activator protein (CAP), C-terminal domain |Escherichia coli [TaxId: 562]
d1o3sa1 : (ASP138) (GLY207) [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Catabolite gene activator protein (CAP), C-terminal domain |Escherichia coli [TaxId: 562]
d3kcca2 : (LEU138) (TYR206) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3r6sa2 : (VAL149) (ASP218) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Corynebacterium glutamicum [TaxId: 1718]
d1ft9a1 : (ASP134) (ASN205) [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |CO-sensing protein CooA, C-terminal domain |Rhodospirillum rubrum [TaxId: 1085]
d4i0ba2 : (ASP139) (TYR207) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3r6sc2 : (VAL149) (ASP218) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Corynebacterium glutamicum [TaxId: 1718]
d1g6na1 : (ASP138) (TYR206) [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Catabolite gene activator protein (CAP), C-terminal domain |Escherichia coli [TaxId: 562]
d3iwza2 : (ASP159) (GLY228) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Xanthomonas campestris [TaxId: 340]
d1g6nb1 : (ASP438) (TYR506) [view usage] : a.4.5.4 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |CAP C-terminal domain-like |Catabolite gene activator protein (CAP), C-terminal domain |Escherichia coli [TaxId: 562]
d3fwea2 : (LEU138) (GLY207) [view usage] : a.4.5.0 |DNA/RNA-binding 3-helical bundle |"Winged helix" DNA-binding domain |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.4