Protein Concepts Dictionary

Tableau information

Concept source:  d3azbi_  amino acid (a.a.) range (ASP88)(LYS181)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HEEHHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP88)   (ILE95) H1
	  (ILE109)  (PRO113) E2
	  (LYS115)  (THR125) E3
	  (PHE129)  (PHE134) H4
	  (PRO141)  (SER160) H5
	  (LEU168)  (GLY173) E6
	  (ASP175)  (LYS181) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
E2       36.2°   E2                                        
E3     -112.8° -148.4°   E3                                 
H4       80.8°  100.4°  -72.0°   H4                          
H5       80.7°  -49.5°  143.7°  144.3°   H5                   
E6       81.1°   89.3°  -90.8°  -20.9°  125.3°   E6            
E7     -153.4°  167.0°  -44.0°  -79.0°  125.4°  -86.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.4°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1u1zb_ :     (ASP3)   (GLN99)   [view usage] : d.38.1.6 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |FabZ-like |(3R)-hydroxymyristoyl ACP dehydrase FabZ |Pseudomonas aeruginosa [TaxId: 287]
 d3az8f_ :    (ILE89)  (LYS180)   [view usage] : d.38.1.6 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |FabZ-like |(3R)-hydroxymyristoyl ACP dehydrase FabZ |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d4keha_ :    (GLY22)  (THR114)   [view usage] : d.38.1.2 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |beta-Hydroxydecanol thiol ester dehydrase |beta-Hydroxydecanol thiol ester dehydrase |Escherichia coli [TaxId: 562]
 d3az9g_ :    (ILE89)  (LYS181)   [view usage] : d.38.1.6 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |FabZ-like |(3R)-hydroxymyristoyl ACP dehydrase FabZ |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d3az9x_ :    (ILE89)  (LYS181)   [view usage] : d.38.1.6 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |FabZ-like |(3R)-hydroxymyristoyl ACP dehydrase FabZ |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d3q62b_ :     (THR9)  (THR115)   [view usage] : d.38.1.2 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |beta-Hydroxydecanol thiol ester dehydrase |automated matches |Yersinia pseudotuberculosis [TaxId: 214092]
 d4kehb_ :     (THR8)  (PHE113)   [view usage] : d.38.1.2 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |beta-Hydroxydecanol thiol ester dehydrase |beta-Hydroxydecanol thiol ester dehydrase |Escherichia coli [TaxId: 562]
 d4i83a_ :     (GLU8)  (LYS101)   [view usage] : d.38.1.0 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |automated matches |automated matches |Neisseria meningitidis [TaxId: 272831]
 d3azbi_ :    (ASP88)  (LYS181)   [view usage] : d.38.1.6 |Thioesterase/thiol ester dehydrase-isomerase |Thioesterase/thiol ester dehydrase-isomerase |FabZ-like |(3R)-hydroxymyristoyl ACP dehydrase FabZ |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.38