Protein Concepts Dictionary

Tableau information

Concept source:  d3drsa2  amino acid (a.a.) range (ASP121)(ARG211)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HEEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP121)  (ALA129) H1
	  (ALA129)  (ILE135) E2
	  (ILE142)  (TYR146) E3
	  (TRP153)  (ASN175) H4
	  (ASP177)  (TYR183) E5
	  (ASP185)  (SER191) E6
	  (ILE195)  (ARG211) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
E2      -29.0°   E2                                        
E3      143.9°  156.0°   E3                                 
H4     -149.6° -128.9°   40.4°   H4                          
E5       25.3°   45.5° -144.0°  174.3°   E5                   
E6     -138.3° -130.7°   29.3°  -21.1°  158.8°   E6            
H7      -74.2°  -74.0°  129.9°  129.2°  -52.8°  147.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2jlea1 :   (ASP121)  (GLY213)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |automated matches |Human immunodeficiency virus 1 [TaxId: 11676]
 d3irxa1 :   (ASP121)  (GLY213)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
 d2ykna1 :   (ASP121)  (ARG211)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |automated matches |Human immunodeficiency virus type 1 bh10 [TaxId: 11678]
 d2ykma1 :   (ASP121)  (ARG211)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |automated matches |Human immunodeficiency virus type 1 bh10 [TaxId: 11678]
 d1bqma2 :   (GLU122)  (GLY213)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
 d1uwba2 :   (ASP121)  (ARG211)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
 d3drsa2 :   (ASP121)  (ARG211)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
 d4mfba1 :   (ASP121)  (GLY213)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
 d1j5oa2 :   (ASP121)  (GLY213)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
 d1n5ya2 :   (ASP121)  (GLY213)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
 d1ikxa2 :   (ASP121)  (ARG211)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
 d3dlka1 :   (ASP121)  (GLY213)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
 d3qo9a1 :   (ASP121)  (LEU210)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]
 d3drra2 :   (ASP121)  (ARG211)   [view usage] : e.8.1.2 |DNA/RNA polymerases |DNA/RNA polymerases |Reverse transcriptase |HIV-1 reverse transcriptase |Human immunodeficiency virus type 1 [TaxId: 11676]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.8