Protein Concepts Dictionary

Tableau information

Concept source:  d2zfzf_  amino acid (a.a.) range (ARG96)(ARG170)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HEEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG96)  (LEU105) H1
	  (SER107)  (GLY112) E2
	  (ASN113)  (THR119) E3
	  (ALA123)  (ALA134) H4
	  (VAL140)  (ASP146) E5
	  (ASP147)  (VAL152) E6
	  (THR158)  (ARG170) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
E2      106.5°   E2                                        
E3       65.7°  161.4°   E3                                 
H4     -152.5°  -61.5°  132.9°   H4                          
E5       37.9°  131.2°  -33.4° -166.2°   E5                   
E6     -130.9°  -33.0°  162.2°  -29.4°  164.1°   E6            
H7      -87.4°  165.1°  -31.4°  103.6°  -63.5°  132.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.9°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2p5ma_ :    (ASN71)  (LEU149)   [view usage] : d.74.2.1 |DCoH-like |C-terminal domain of arginine repressor |C-terminal domain of arginine repressor |C-terminal domain of arginine repressor |Bacillus subtilis [TaxId: 1423]
 d1b24a1 :     (VAL7)   (ARG97)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |DNA endonuclease I-dmoI |Desulfurococcus mobilis [TaxId: 2274]
 d2zfza_ :    (MET97)  (ARG170)   [view usage] : d.74.2.0 |DCoH-like |C-terminal domain of arginine repressor |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d3oora1 :    (ASN30)  (PHE116)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1xxab_ :    (LEU82)  (PHE152)   [view usage] : d.74.2.1 |DCoH-like |C-terminal domain of arginine repressor |C-terminal domain of arginine repressor |C-terminal domain of arginine repressor |Escherichia coli [TaxId: 562]
 d2zfzd_ :    (THR94)  (ARG170)   [view usage] : d.74.2.0 |DCoH-like |C-terminal domain of arginine repressor |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d2p5mb_ :    (ASN71)  (GLU147)   [view usage] : d.74.2.1 |DCoH-like |C-terminal domain of arginine repressor |C-terminal domain of arginine repressor |C-terminal domain of arginine repressor |Bacillus subtilis [TaxId: 1423]
 d2zfzf_ :    (ARG96)  (ARG170)   [view usage] : d.74.2.0 |DCoH-like |C-terminal domain of arginine repressor |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d1dfaa3 :   (ASN311)  (CYS398)   [view usage] : d.95.2.2 |Homing endonuclease-like |Homing endonucleases |Intein endonuclease |VMA1-derived endonuclease (VDE) PI-SceI |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1r7ma1 :    (ASN30)  (PHE116)   [view usage] : d.95.2.1 |Homing endonuclease-like |Homing endonucleases |Group I mobile intron endonuclease |DNA endonuclease I-SceI |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2zfzb_ :    (GLY93)  (ARG170)   [view usage] : d.74.2.0 |DCoH-like |C-terminal domain of arginine repressor |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d1dq3a3 :   (PHE138)  (LEU220)   [view usage] : d.95.2.2 |Homing endonuclease-like |Homing endonucleases |Intein endonuclease |PI-Pfui intein |Pyrococcus furiosus [TaxId: 2261]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.74,    d.95