Tableau information
Concept source: d4jbda_ amino acid (a.a.) range (ARG44)(ALA132)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: HEEHEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG44) (LEU50) H1
(VAL58) (LEU63) E2
(GLY75) (ASN81) E3
(GLY91) (GLY103) H4
(GLY108) (THR114) E5
(VAL119) (GLU125) E6
(ALA128) (ALA132) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 138.9° E2
E3 -62.8° 145.2° E3
H4 86.7° -54.4° 120.7° H4
E5 -120.6° 95.6° -58.0° 126.4° E5
E6 46.1° -92.8° 101.5° -43.1° 151.2° E6
E7 -133.7° 82.1° -96.4° 136.3° -53.8° 154.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.2° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1qy9c1 : (SER31) (GLU119) [view usage] : d.21.1.2 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |PhzC/PhzF-like |Hypothetical protein YddE |Escherichia coli [TaxId: 562]
d4ijza1 : (SER26) (MET118) [view usage] : d.21.1.1 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |Diaminopimelate epimerase |Diaminopimelate epimerase |Escherichia coli K-12 [TaxId: 83333]
d1gqza1 : (PRO27) (GLY119) [view usage] : d.21.1.1 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |Diaminopimelate epimerase |Diaminopimelate epimerase |Haemophilus influenzae [TaxId: 727]
d1qy9a1 : (SER31) (GLU119) [view usage] : d.21.1.2 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |PhzC/PhzF-like |Hypothetical protein YddE |Escherichia coli [TaxId: 562]
d4k7gb_ : (GLU45) (LEU142) [view usage] : d.21.1.0 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |automated matches |automated matches |Agrobacterium vitis [TaxId: 311402]
d4lb0b_ : (ASP44) (MET146) [view usage] : d.21.1.0 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |automated matches |automated matches |Agrobacterium vitis [TaxId: 311402]
d1bwza1 : (PRO27) (GLY119) [view usage] : d.21.1.1 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |Diaminopimelate epimerase |Diaminopimelate epimerase |Haemophilus influenzae [TaxId: 727]
d1w61a_ : (ASP85) (ASN188) [view usage] : d.21.1.0 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
d2azpa_ : (ASP43) (ASN133) [view usage] : d.21.1.0 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d1qy9d1 : (SER31) (GLU119) [view usage] : d.21.1.2 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |PhzC/PhzF-like |Hypothetical protein YddE |Escherichia coli [TaxId: 562]
d1w62b_ : (ASP85) (ILE187) [view usage] : d.21.1.0 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
d4jbda_ : (ARG44) (ALA132) [view usage] : d.21.1.0 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |automated matches |automated matches |Pseudomonas putida [TaxId: 351746]
d4k7gd_ : (ASN53) (LEU142) [view usage] : d.21.1.0 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |automated matches |automated matches |Agrobacterium vitis [TaxId: 311402]
d4duna_ : (LEU30) (PRO114) [view usage] : d.21.1.0 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
d4duna_ : (TYR161) (ILE258) [view usage] : d.21.1.0 |Diaminopimelate epimerase-like |Diaminopimelate epimerase-like |automated matches |automated matches |Clostridium difficile [TaxId: 272563]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.21