Protein Concepts Dictionary

Tableau information

Concept source:  d1i8da2  amino acid (a.a.) range (ASP127)(MET206)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HEEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP127)  (TYR133) H1
	  (GLY138)  (ASP143) E2
	  (GLY150)  (PRO154) E3
	  (PHE157)  (PRO163) E4
	  (PRO163)  (ARG168) H5
	  (GLY177)  (ASP185) E6
	  (ASP185)  (MET206) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
E2      129.3°   E2                                        
E3     -137.8°   90.0°   E3                                 
E4       61.8°  -70.6°  160.2°   E4                          
H5      127.9°  -27.2°  -78.8°  -85.1°   H5                   
E6       48.5°  129.8°  -96.7°   98.7°  106.1°   E6            
H7       98.2° -126.3°  -39.6°  159.5° -106.2°  -62.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4g6ic2 :   (PRO130)  (GLN199)   [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Brucella abortus [TaxId: 235]
 d4e0fb2 :   (PRO130)  (LEU203)   [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Brucella abortus [TaxId: 235]
 d4e0fa2 :   (PRO130)  (GLN199)   [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Brucella abortus [TaxId: 235]
 d4g6ib2 :   (PRO130)  (GLN201)   [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Brucella abortus [TaxId: 235]
 d4e0fc2 :   (GLU131)  (TYR200)   [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Brucella abortus [TaxId: 235]
 d1kzla2 :   (ASP127)  (TRP202)   [view usage] : b.43.4.3 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Riboflavin synthase |Riboflavin synthase |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
 d1i8da2 :   (ASP127)  (MET206)   [view usage] : b.43.4.3 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |Riboflavin synthase |Riboflavin synthase |Escherichia coli [TaxId: 562]
 d4gqnb2 :   (PRO130)  (HIS205)   [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Brucella abortus [TaxId: 235]
 d4fxuc2 :   (PRO130)  (LEU197)   [view usage] : b.43.4.0 |Reductase/isomerase/elongation factor common domain |Riboflavin synthase domain-like |automated matches |automated matches |Brucella abortus [TaxId: 235]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.43