Protein Concepts Dictionary

Tableau information

Concept source:  d4icka_  amino acid (a.a.) range (ASP50)(HIS150)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HEEEEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP50)   (GLU61) H1
	   (LEU70)   (GLY75) E2
	   (GLY75)   (ASN81) E3
	   (PRO88)  (ASP100) E4
	  (GLN112)  (TRP116) E5
	  (LEU119)  (LEU125) H6
	  (LYS129)  (HIS150) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
E2      144.3°   E2                                        
E3       80.8°  -89.0°   E3                                 
E4      -66.9°  117.0°  147.7°   E4                          
E5     -108.5°   60.6°  140.3°  -56.8°   E5                   
H6       86.1°  -95.8°  -19.9°  147.2° -155.2°   H6            
H7     -105.6°   82.7°  171.6°  -39.0°  -32.9°  162.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1vc8a1 :    (SER38)  (ARG123)   [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |AP6A hydrolase Ndx1 |Thermus thermophilus [TaxId: 274]
 d1ktga_ :    (ASP44)  (PHE138)   [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) |Nematode (Caenorhabditis elegans) [TaxId: 6239]
 d3u53a_ :    (ASP50)  (ALA147)   [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1vc9a1 :    (LEU39)  (LEU124)   [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |AP6A hydrolase Ndx1 |Thermus thermophilus [TaxId: 274]
 d4icka_ :    (ASP50)  (HIS150)   [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1xsaa_ :    (ASP56)  (CYS148)   [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) |Human (Homo sapiens) [TaxId: 9606]
 d1su2a_ :    (ASN57)  (LYS152)   [view usage] : d.113.1.1 |Nudix |Nudix |MutT-like |Hypothetical protein DR1025 |Deinococcus radiodurans [TaxId: 1299]
 d3gwyb_ :    (SER46)  (GLY132)   [view usage] : d.113.1.0 |Nudix |Nudix |automated matches |automated matches |Bacteroides fragilis [TaxId: 272559]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.113