Protein Concepts Dictionary

Tableau information

Concept source:  d1ekga_  amino acid (a.a.) range (GLU92)(ALA193)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: HEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLU92)  (ALA114) H1
	  (TYR123)  (GLY128) E2
	  (GLY130)  (LEU136) E3
	  (GLY141)  (ASN146) E4
	  (LYS152)  (SER158) E5
	  (GLY162)  (TRP168) E6
	  (SER181)  (ALA193) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                               
E2     -154.6°   E2                                        
E3       24.0°  173.3°   E3                                 
E4     -153.4°  -16.1°  170.6°   E4                          
E5      -27.8°  158.2°  -15.1°  174.1°   E5                   
E6      129.3°  -46.9°  139.6°  -31.1°  153.9°   E6            
H7      -17.7°  154.5°   19.8° -164.8°   12.8° -147.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3s5fa_ :    (GLU92)  (ALA193)   [view usage] : d.82.2.1 |N domain of copper amine oxidase-like |Frataxin/Nqo15-like |Frataxin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ga5a1 :    (PRO18)  (GLN123)   [view usage] : d.82.2.1 |N domain of copper amine oxidase-like |Frataxin/Nqo15-like |Frataxin-like |C-terminal domain of frataxin |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3t3ta_ :    (GLU92)  (ALA193)   [view usage] : d.82.2.1 |N domain of copper amine oxidase-like |Frataxin/Nqo15-like |Frataxin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3t3xa_ :    (GLU92)  (ALA193)   [view usage] : d.82.2.1 |N domain of copper amine oxidase-like |Frataxin/Nqo15-like |Frataxin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3s4ma_ :    (ASP91)  (ALA193)   [view usage] : d.82.2.1 |N domain of copper amine oxidase-like |Frataxin/Nqo15-like |Frataxin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ew4a_ :    (ALA10)  (GLY100)   [view usage] : d.82.2.1 |N domain of copper amine oxidase-like |Frataxin/Nqo15-like |Frataxin-like |CyaY |Escherichia coli [TaxId: 562]
 d3s5ea_ :    (GLU92)  (ALA193)   [view usage] : d.82.2.1 |N domain of copper amine oxidase-like |Frataxin/Nqo15-like |Frataxin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3t3xb_ :    (GLU92)  (ALA193)   [view usage] : d.82.2.1 |N domain of copper amine oxidase-like |Frataxin/Nqo15-like |Frataxin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3t3ka_ :    (GLU92)  (ALA193)   [view usage] : d.82.2.1 |N domain of copper amine oxidase-like |Frataxin/Nqo15-like |Frataxin-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ekga_ :    (GLU92)  (ALA193)   [view usage] : d.82.2.1 |N domain of copper amine oxidase-like |Frataxin/Nqo15-like |Frataxin-like |C-terminal domain of frataxin |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.82