Tableau information
Concept source: d3quid_ amino acid (a.a.) range (SER6)(ARG66)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: HEEEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(SER6) (ARG19) H1
(VAL22) (LEU26) E2
(ILE30) (GLY34) E3
(GLU37) (GLN41) E4
(PHE42) (ASN48) E5
(VAL50) (TYR55) E6
(SER60) (ARG66) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 -130.2° E2
E3 -54.0° 154.9° E3
E4 -166.5° 45.3° -123.3° E4
E5 17.6° -125.7° 66.1° -170.4° E5
E6 176.4° 50.0° -127.7° -16.8° 158.9° E6
E7 43.2° 163.7° -39.9° -145.4° 42.2° -135.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1u1sc_ : (HIS5) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d3m4gg_ : (HIS5) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d4juvb_ : (LEU7) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2ylbf_ : (SER6) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Salmonella enterica [TaxId: 99287]
d4noye_ : (GLN6) (LYS68) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Listeria monocytogenes [TaxId: 1639]
d3vu3e_ : (GLN8) (SER65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4mmkj_ : (LEU7) (SER65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d1hk9f_ : (LEU7) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Escherichia coli [TaxId: 562]
d3m4gd_ : (SER6) (SER65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d1hk9d_ : (SER6) (SER65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Escherichia coli [TaxId: 562]
d4mmka_ : (HIS5) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d3inzf_ : (HIS5) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d3m4gc_ : (HIS5) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d4noyd_ : (GLN6) (LYS68) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Listeria monocytogenes [TaxId: 1639]
d4noya_ : (GLN6) (LYS68) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Listeria monocytogenes [TaxId: 1639]
d3quid_ : (SER6) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d4jrib_ : (GLN5) (SER65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2ylbb_ : (LEU7) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Salmonella enterica [TaxId: 99287]
d3inzc_ : (HIS5) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d4mmkf_ : (LEU12) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d4nl3b_ : (GLN6) (LYS68) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Listeria monocytogenes [TaxId: 1639]
d4mmki_ : (HIS5) (SER65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d3quia_ : (HIS5) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d3quic_ : (HIS5) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d4jlia_ : (LEU7) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli [TaxId: 562]
d3sb2b_ : (GLN6) (ALA66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Herbaspirillum seropedicae [TaxId: 757424]
d4nl2b_ : (GLN6) (LYS68) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Listeria monocytogenes [TaxId: 1639]
d1u1te_ : (HIS5) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d3qhsc_ : (LEU7) (SER65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3sb2a_ : (GLN6) (ALA66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Herbaspirillum seropedicae [TaxId: 757424]
d3qhsb_ : (LEU7) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1hk9e_ : (SER6) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Escherichia coli [TaxId: 562]
d3m4gj_ : (LEU7) (SER65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d4nl2a_ : (GLN6) (LYS68) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Listeria monocytogenes [TaxId: 1639]
d3m4gf_ : (HIS5) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d4j6wa_ : (HIS5) (SER65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d4jrkc_ : (GLN5) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3ahua_ : (ILE6) (LYS66) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d3qhsk_ : (LEU7) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4juvc_ : (GLN5) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3m4ga_ : (LEU7) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d3sb2e_ : (LEU8) (ARG67) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Herbaspirillum seropedicae [TaxId: 757424]
d4j6xf_ : (LEU7) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d4noyf_ : (GLN6) (LYS68) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Listeria monocytogenes [TaxId: 1639]
d4juva_ : (LEU7) (SER65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3sb2d_ : (LEU8) (ALA66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Herbaspirillum seropedicae [TaxId: 757424]
d2ylca_ : (LEU7) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Salmonella enterica [TaxId: 99287]
d3qhsd_ : (LEU7) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli K-12 [TaxId: 83333]
d3m4gb_ : (LYS3) (SER65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d4nl2f_ : (GLN6) (LYS68) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Listeria monocytogenes [TaxId: 1639]
d4nl3a_ : (GLN6) (LYS68) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Listeria monocytogenes [TaxId: 1639]
d1kq2h_ : (ILE7) (GLU66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Staphylococcus aureus [TaxId: 1280]
d3gibb_ : (GLN5) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4jrkb_ : (GLN5) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1kq1b_ : (ASN6) (GLU66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Staphylococcus aureus [TaxId: 1280]
d3gibc_ : (SER6) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4jria_ : (SER6) (SER65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4mmkg_ : (HIS5) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d4noyb_ : (GLN6) (GLN67) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Listeria monocytogenes [TaxId: 1639]
d3quif_ : (GLN8) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d3vu3d_ : (LEU7) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli K-12 [TaxId: 83333]
d4jlib_ : (LEU7) (SER65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli [TaxId: 562]
d4j6wf_ : (HIS5) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d3inze_ : (LYS3) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d3qhsa_ : (LEU7) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli K-12 [TaxId: 83333]
d2yhta_ : (LEU7) (SER65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli [TaxId: 562]
d3sb2f_ : (LEU8) (ARG67) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Herbaspirillum seropedicae [TaxId: 757424]
d1u1se_ : (HIS5) (SER65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d4mmla_ : (LEU7) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d3sb2c_ : (LEU8) (PRO65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Herbaspirillum seropedicae [TaxId: 757424]
d4j5yd_ : (HIS5) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d1hk9a_ : (LEU7) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Escherichia coli [TaxId: 562]
d3hsbd_ : (ILE6) (LYS66) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d4noyc_ : (GLN6) (LYS68) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Listeria monocytogenes [TaxId: 1639]
d4jrka_ : (SER6) (SER65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1kq1h_ : (ASN6) (GLU66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Staphylococcus aureus [TaxId: 1280]
d1hk9b_ : (LEU7) (SER65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Escherichia coli [TaxId: 562]
d4nl2c_ : (GLN9) (LYS68) [view usage] : b.38.1.0 |Sm-like fold |Sm-like ribonucleoproteins |automated matches |automated matches |Listeria monocytogenes [TaxId: 1639]
d3m4ge_ : (HIS5) (ARG66) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |Pleiotropic translational regulator Hfq |Pseudomonas aeruginosa [TaxId: 287]
d3vu3f_ : (LEU7) (SER65) [view usage] : b.38.1.2 |Sm-like fold |Sm-like ribonucleoproteins |Pleiotropic translational regulator Hfq |automated matches |Escherichia coli K-12 [TaxId: 83333]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.38