Protein Concepts Dictionary

Tableau information

Concept source:  d3my0d_  amino acid (a.a.) range (LEU351)(LYS491)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU351)  (GLN357) E1
	  (ALA377)  (GLU383) H2
	  (CYS389)  (THR412) H3
	  (SER434)  (GLN446) H4
	  (PRO452)  (ASP458) H5
	  (ASP458)  (TYR473) H6
	  (THR481)  (LYS491) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2      109.8°   H2                                        
H3     -127.0° -122.0°   H3                                 
H4      -53.4° -120.6°   88.9°   H4                          
H5      -45.2° -152.7°   85.0°  -58.2°   H5                   
H6       84.6°  -25.6° -145.0° -102.2° -129.1°   H6            
H7      -95.8° -153.6°  -31.6°   70.1°   53.6°  169.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2bdwa_ :   (LEU159)  (VAL268)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
 d2woua_ :   (ALA355)  (SER496)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Type I TGF-beta receptor R4 |Human (Homo sapiens) [TaxId: 9606]
 d3my0n_ :   (LEU351)  (SER493)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1iasa_ :   (ASP363)  (GLN497)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Type I TGF-beta receptor R4 |Human (Homo sapiens) [TaxId: 9606]
 d2y0aa_ :   (LEU164)  (HIS272)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3q4ub_ :   (LEU357)  (ILE498)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3my0d_ :   (LEU351)  (LYS491)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3mfsa_ :   (VAL165)  (HIS273)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3my0c_ :   (LEU351)  (ILE492)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2bdwb_ :   (GLY158)  (VAL268)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
 d2vz6b_ :   (LEU159)  (HIS268)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2vn9a_ :   (LEU160)  (HIS269)   [view usage] : d.144.1.0 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3my0o_ :   (LEU351)  (GLN490)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.144