Protein Concepts Dictionary

Tableau information

Concept source:  d3i7qa_  amino acid (a.a.) range (HIS200)(GLY290)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (HIS200)  (SER204) E1
	  (SER204)  (ALA210) H2
	  (MET214)  (GLY224) H3
	  (HIS225)  (LEU236) H4
	  (LEU236)  (PRO247) H5
	  (PRO247)  (GLY260) H6
	  (THR275)  (GLY290) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2      -64.0°   H2                                        
H3      162.3° -128.6°   H3                                 
H4       10.2°   74.1° -154.7°   H4                          
H5       51.6°  108.3° -121.9°   42.4°   H5                   
H6      -78.0°   14.0°  114.9°   88.1°  120.9°   H6            
H7     -137.1°  -74.6°   54.1°  147.2° -164.8°  -60.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3e96b_ :   (LYS209)  (LYS301)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Bacillus clausii [TaxId: 66692]
 d3e96a_ :   (LYS209)  (LYS301)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Bacillus clausii [TaxId: 66692]
 d4i7ub_ :   (VAL201)  (GLY291)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Agrobacterium sp. [TaxId: 861208]
 d4i7uc_ :   (VAL201)  (GLY291)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Agrobacterium sp. [TaxId: 861208]
 d1s5va_ :   (HIS200)  (THR281)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Dihydrodipicolinate synthase |Escherichia coli [TaxId: 562]
 d2r8wa_ :   (ASP237)  (SER326)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
 d1s5wa_ :   (HIS200)  (THR281)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Dihydrodipicolinate synthase |Escherichia coli [TaxId: 562]
 d4i7ua_ :   (VAL201)  (GLY291)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Agrobacterium sp. [TaxId: 861208]
 d2r8wb_ :   (ASP237)  (SER326)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Agrobacterium tumefaciens [TaxId: 176299]
 d3m5vc_ :   (LYS204)  (LYS291)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Campylobacter jejuni [TaxId: 197]
 d3m5va_ :   (LYS204)  (LYS291)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Campylobacter jejuni [TaxId: 197]
 d3m5vb_ :   (LYS204)  (LYS291)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Campylobacter jejuni [TaxId: 197]
 d3qzeb_ :   (LYS200)  (GLY289)   [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d3i7qa_ :   (HIS200)  (GLY290)   [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Dihydrodipicolinate synthase |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1