Protein Concepts Dictionary

Tableau information

Concept source:  d1ur2a_  amino acid (a.a.) range (GLY255)(GLU372)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY255)  (VAL267) E1
	  (VAL279)  (TYR285) H2
	  (LYS286)  (PRO291) H3
	  (GLN298)  (HIS318) H4
	  (ARG324)  (TRP328) E5
	  (SER331)  (PRO343) H6
	  (ALA361)  (GLU372) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2       72.5°   H2                                        
H3     -113.3°  -61.5°   H3                                 
H4      176.9° -108.4°  -65.2°   H4                          
E5      -29.9°  -83.8° -139.6°  152.6°   E5                   
H6      -80.7° -148.3°  148.0°   99.3°   64.6°   H6            
H7      140.7°  -89.6°   31.3°  -37.0° -170.3°  122.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1ur2a_ :   (GLY255)  (GLU372)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase |Cellvibrio mixtus [TaxId: 39650]
 d1uqya_ :   (GLY255)  (GLU372)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase |Cellvibrio mixtus [TaxId: 39650]
 d1uqza_ :   (GLY255)  (GLU372)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Xylanase |Cellvibrio mixtus [TaxId: 39650]
 d2cnca_ :   (ARG266)  (GLU381)   [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Cellvibrio mixtus [TaxId: 39650]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1