Tableau information
Concept source: d4cybd_ amino acid (a.a.) range (GLY34)(VAL193)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EHHEHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY34) (GLN38) E1
(THR44) (TRP74) H2
(PHE81) (GLY110) H3
(GLY110) (ASP116) E4
(ASP116) (GLU122) H5
(GLU135) (GLY165) H6
(ASP167) (VAL193) H7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 131.7° H2
H3 -47.8° -161.0° H3
E4 150.4° -24.4° -144.3° E4
H5 -107.2° -108.3° 87.5° -101.0° H5
H6 -36.6° -167.5° 24.2° 167.4° 77.6° H6
H7 145.8° 22.9° -166.3° 27.9° -85.4° -160.0°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3ge4a_ : (SER6) (GLN163) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Brucella melitensis [TaxId: 29459]
d4cybj_ : (GLY34) (VAL193) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Streptomyces coelicolor [TaxId: 1902]
d1mojb_ : (GLY12) (GLY144) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Halobacterium salinarum [TaxId: 2242]
d4cybd_ : (GLY34) (VAL193) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Streptomyces coelicolor [TaxId: 1902]
d4cyba_ : (GLY34) (VAL193) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Streptomyces coelicolor [TaxId: 1902]
d1o9ra_ : (MET1) (LYS161) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Agrobacterium tumefaciens, Dps [TaxId: 358]
d1moja_ : (GLY12) (GLY144) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |Dodecameric ferritin homolog |Halobacterium salinarum [TaxId: 2242]
d4cy9a_ : (ALA3) (GLU162) [view usage] : a.25.1.1 |Ferritin-like |Ferritin-like |Ferritin |automated matches |Streptomyces coelicolor [TaxId: 1902]
d2vxxb_ : (GLY12) (LEU169) [view usage] : a.25.1.0 |Ferritin-like |Ferritin-like |automated matches |automated matches |Synechococcus elongatus [TaxId: 32046]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
a.25