Protein Concepts Dictionary

Tableau information

Concept source:  d4hlsb_  amino acid (a.a.) range (TYR128)(ALA229)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (TYR128)  (SER132) E1
	  (ASN143)  (ASN153) H2
	  (ASN153)  (PRO158) H3
	  (ASN159)  (TYR163) E4
	  (PRO165)  (ASN170) H5
	  (GLN172)  (GLY195) H6
	  (THR199)  (ALA229) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2      -76.8°   H2                                        
H3     -139.3°  -79.6°   H3                                 
E4      148.2°  101.4°   21.8°   E4                          
H5     -115.1°  161.3°   82.3°   60.7°   H5                   
H6      -84.5°   59.2°  110.8°  122.4°  133.3°   H6            
H7       87.7°  -71.4°  -53.2°  -62.3°  -94.0°  130.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1tpxa_ :   (GLY130)  (TYR228)   [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |Prion protein domain |Sheep (Ovis aries) [TaxId: 9940]
 d4hmra_ :   (TYR128)  (GLN223)   [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d3o79b_ :   (GLY127)  (ALA230)   [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |Prion protein domain |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d3o79a_ :   (GLY126)  (SER222)   [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |Prion protein domain |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d4hlsa_ :   (GLY126)  (SER222)   [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d4h88a_ :   (GLY126)  (TYR225)   [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d4hmmb_ :   (GLY127)  (ALA230)   [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d4hmma_ :   (GLY126)  (SER222)   [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d4hmrb_ :   (TYR128)  (ALA229)   [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
 d2w9ea_ :   (GLY127)  (SER222)   [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4hlsb_ :   (TYR128)  (ALA229)   [view usage] : d.6.1.1 |Prion-like |Prion-like |Prion-like |automated matches |Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   d.6