Protein Concepts Dictionary

Tableau information

Concept source:  d1lwda_  amino acid (a.a.) range (LYS41)(PRO112)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHHEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS41)   (LEU47) E1
	   (LEU47)   (THR53) H2
	   (GLN56)   (LYS67) H3
	   (SER69)   (CYS74) E4
	   (ASP80)   (GLU86) H5
	   (SER95)  (ILE103) H6
	  (GLY106)  (PRO112) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2      -96.4°   H2                                        
H3     -149.0°  100.2°   H3                                 
E4      -37.0° -121.4°  138.3°   E4                          
H5      102.4°  -79.6°  106.2°   80.8°   H5                   
H6      140.7°   63.9°  -37.4° -172.2° -106.4°   H6            
E7      -76.0° -169.3°   90.0°  -48.3°   94.5°  126.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4ja8b_ :    (LYS80)  (PRO151)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2uxqc_ :    (GLU39)  (PRO110)   [view usage] : c.77.1.0 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |automated matches |automated matches |Desulfotalea psychrophila [TaxId: 84980]
 d3inma_ :    (HIS40)  (ALA111)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1lwda_ :    (LYS41)  (PRO112)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |NADP-dependent isocitrate dehydrogenase |Pig (Sus scrofa) [TaxId: 9823]
 d2qfyb_ :    (LYS41)  (PRO112)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d4ja8a_ :    (LYS80)  (PRO151)   [view usage] : c.77.1.1 |Isocitrate/Isopropylmalate dehydrogenase-like |Isocitrate/Isopropylmalate dehydrogenase-like |Dimeric isocitrate & isopropylmalate dehydrogenases |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.77