Protein Concepts Dictionary

Tableau information

Concept source:  d3ntla_  amino acid (a.a.) range (GLY4)(GLN152)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLY4)   (ARG19) E1
	   (GLY26)   (SER32) H2
	   (THR48)   (GLY70) H3
	   (SER82)   (ASN88) E4
	   (ARG92)  (ALA104) H5
	  (ASP109)  (GLN115) E6
	  (SER133)  (GLN152) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2      -57.5°   H2                                        
H3      177.2°  120.7°   H3                                 
E4      -24.1°   54.0°  153.3°   E4                          
H5      138.7° -106.0°  -43.0°  156.9°   H5                   
E6      -57.1°   77.3°  120.9°  -35.6°  163.2°   E6            
H7      -85.9°  -38.5°   93.5°  -90.9°   67.7° -115.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4eo9a_ :     (ALA7)  (LEU101)   [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Mycobacterium leprae [TaxId: 561304]
 d3ntlb_ :    (ASN17)  (MET151)   [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |automated matches |Enterobacter cloacae [TaxId: 550]
 d1riid_ :     (SER6)   (LEU99)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |Phosphoglycerate mutase |Mycobacterium tuberculosis [TaxId: 1773]
 d2wnha_ :    (PRO11)  (GLN140)   [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
 d1yjxi_ :     (TYR4)   (LEU98)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3ntla_ :     (GLY4)  (GLN152)   [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |automated matches |Enterobacter cloacae [TaxId: 550]
 d2wnia_ :    (ASP13)  (GLN140)   [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
 d1dkma_ :     (GLU5)  (GLY131)   [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) |Escherichia coli [TaxId: 562]
 d1dkpa_ :     (GLU9)  (GLY131)   [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Phytase (myo-inositol-hexakisphosphate-3-phosphohydrolase) |Escherichia coli [TaxId: 562]
 d1nt4a_ :     (GLY6)  (SER151)   [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |Glucose-1-phosphatase |Escherichia coli [TaxId: 562]
 d3zhcb_ :     (GLY5)  (SER134)   [view usage] : c.60.1.2 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Histidine acid phosphatase |automated matches |Citrobacter braakii [TaxId: 57706]
 d2wnib_ :    (ASP13)  (GLN140)   [view usage] : c.60.1.0 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
 d1yjxf_ :     (TYR4)   (LEU98)   [view usage] : c.60.1.1 |Phosphoglycerate mutase-like |Phosphoglycerate mutase-like |Cofactor-dependent phosphoglycerate mutase |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.60