Tableau information
Concept source: d4bf7a_ amino acid (a.a.) range (ARG5)(ASN125)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EHHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ARG5) (SER11) E1
(LEU12) (GLY19) H2
(PHE32) (GLY40) H3
(ASN42) (ASN51) E4
(ASN58) (GLY73) H5
(SER75) (HIS81) E6
(ILE103) (ASN125) H7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 47.9° H2
H3 173.0° 131.0° H3
E4 -35.1° -83.0° 144.8° E4
H5 141.3° 94.5° -40.6° -170.4° H5
E6 -52.1° -93.2° 124.1° -28.9° 160.7° E6
H7 103.8° 62.7° -79.3° 133.1° -39.2° 155.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3ngfa_ : (VAL172) (ALA254) [view usage] : c.1.15.0 |TIM beta/alpha-barrel |Xylose isomerase-like |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
d1yx1a1 : (ASP155) (LEU250) [view usage] : c.1.15.7 |TIM beta/alpha-barrel |Xylose isomerase-like |KguE-like |Hypothetical protein PA2260 |Pseudomonas aeruginosa [TaxId: 287]
d4wuia_ : (GLU120) (ARG198) [view usage] : c.1.2.0 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |automated matches |automated matches |Jonesia denitrificans [TaxId: 471856]
d3ngfb_ : (VAL172) (ALA254) [view usage] : c.1.15.0 |TIM beta/alpha-barrel |Xylose isomerase-like |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
d1egza_ : (LYS19) (PHE112) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Endoglucanase Cel5a |Erwinia chrysanthemi [TaxId: 556]
d3ng3c_ : (VAL123) (GLY206) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Mycobacterium avium [TaxId: 243243]
d1nvmc2 : (VAL137) (GLY219) [view usage] : c.1.10.5 |TIM beta/alpha-barrel |Aldolase |HMGL-like |4-hydroxy-2-oxovalerate aldolase DmpG, catalytic domain |Pseudomonas sp. [TaxId: 306]
d1nvma2 : (VAL137) (GLY219) [view usage] : c.1.10.5 |TIM beta/alpha-barrel |Aldolase |HMGL-like |4-hydroxy-2-oxovalerate aldolase DmpG, catalytic domain |Pseudomonas sp. [TaxId: 306]
d1e9ia1 : (ASN336) (ALA414) [view usage] : c.1.11.1 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |Enolase |Enolase |Escherichia coli [TaxId: 562]
d2gftb_ : (LYS26) (GLY154) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Bacillus licheniformis [TaxId: 1402]
d1hjqa_ : (LYS5) (GLY124) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-1,4-galactanase |Fungus (Humicola insolens) [TaxId: 34413]
d1u5va_ : (GLY131) (ALA222) [view usage] : c.1.12.5 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |HpcH/HpaI aldolase |Citrate lyase, beta subunit |Mycobacterium tuberculosis [TaxId: 1773]
d1ur0b_ : (LYS26) (GLY154) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-1,4-galactanase |Bacillus licheniformis [TaxId: 1402]
d1r8lb_ : (LYS26) (GLY154) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-1,4-galactanase |Bacillus licheniformis [TaxId: 1402]
d3rjxa_ : (ASN220) (LEU341) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Fervidobacterium nodosum [TaxId: 381764]
d1ub3a_ : (VAL120) (ALA197) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |Deoxyribose-phosphate aldolase DeoC |Thermus thermophilus [TaxId: 274]
d4bf7a_ : (ARG5) (ASN125) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Emericella nidulans [TaxId: 162425]
d1u5ha_ : (GLY131) (TYR221) [view usage] : c.1.12.5 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |HpcH/HpaI aldolase |Citrate lyase, beta subunit |Mycobacterium tuberculosis [TaxId: 1773]
d4lx4b_ : (ARG200) (LEU314) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Pseudomonas stutzeri [TaxId: 379731]
d2qafb_ : (THR100) (ASN183) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |Protozoan orotidine monophosphate decarboxylase |Plasmodium falciparum (isolate 3D7) (Plasmodium falciparum 3D7) [TaxId: 36329]
d2g0wb_ : (ASP39) (GLU135) [view usage] : c.1.15.4 |TIM beta/alpha-barrel |Xylose isomerase-like |IolI-like |Hypothetical protein Lmo2234 |Listeria monocytogenes [TaxId: 1639]
d3abxa_ : (GLY18) (THR135) [view usage] : c.6.1.0 |7-stranded beta/alpha barrel |Glycosyl hydrolases family 6, cellulases |automated matches |automated matches |Inky cap fungus (Coprinopsis cinerea) [TaxId: 5346]
d3m7wa_ : (ASP43) (ASN135) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |automated matches |Salmonella enterica [TaxId: 99287]
d4ooub_ : (PHE276) (GLN361) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Cryptopygus antarcticus [TaxId: 187623]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.6