Tableau information
Concept source: d1tp9d_ amino acid (a.a.) range (VAL38)(GLY113)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EHHEHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL38) (PRO44) E1
(VAL56) (LYS62) H2
(LYS62) (GLY70) H3
(ILE74) (VAL79) E4
(PRO82) (PRO93) H5
(LYS99) (SER105) E6
(THR107) (GLY113) H7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -160.1° H2
H3 145.4° -54.5° H3
E4 -31.3° -162.3° 117.4° E4
H5 107.3° -55.7° -102.7° 138.5° H5
E6 -48.9° 149.9° 97.7° -20.5° 153.4° E6
H7 -106.4° 85.2° 56.4° -103.2° 89.6° -87.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2xhfa_ : (GLY69) (GLY143) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Alvinella pompejana [TaxId: 6376]
d2xhfb_ : (GLY69) (GLY143) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Alvinella pompejana [TaxId: 6376]
d1xccd_ : (TRP33) (LEU111) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |1-Cys peroxiredoxin |Plasmodium yoelii yoelii [TaxId: 73239]
d3umab_ : (VAL36) (GLY111) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
d2a4va1 : (ARG92) (GLY164) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Peroxiredoxin dot5 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3zvjh_ : (TYR34) (GLY113) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d4txod_ : (PRO64) (TYR144) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Bradyrhizobium diazoefficiens [TaxId: 224911]
d1qq2a_ : (TYR38) (GLY117) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Thioredoxin peroxidase 2 (thioredoxin peroxidase B, 2-cys peroxiredoxin) |Norway rat (Rattus norvegicus) [TaxId: 10116]
d1nm3a2 : (ILE37) (GLY110) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |N-terminal, Prx domain of Hybrid-Prx5 |Haemophilus influenzae [TaxId: 727]
d3umac_ : (VAL36) (GLY111) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Rhizobium meliloti (Sinorhizobium meliloti) [TaxId: 382]
d1xcca_ : (TRP33) (LEU111) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |1-Cys peroxiredoxin |Plasmodium yoelii yoelii [TaxId: 73239]
d3zvji_ : (VAL35) (GLY113) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d1xccb_ : (TRP33) (LEU111) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |1-Cys peroxiredoxin |Plasmodium yoelii yoelii [TaxId: 73239]
d1tp9d_ : (VAL38) (GLY113) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Western balsam poplar (Populus trichocarpa) [TaxId: 3694]
d3zvjc_ : (VAL36) (GLY113) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d1tp9a1 : (VAL38) (GLY113) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Plant peroxiredoxin |Western balsam poplar (Populus trichocarpa) [TaxId: 3694]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.47