Tableau information
Concept source: d1q5yb_ amino acid (a.a.) range (GLY52)(PRO130)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EHHEEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY52) (GLU63) E1
(ASP66) (HIS78) H2
(HIS78) (VAL83) H3
(VAL83) (HIS89) E4
(ASP93) (GLY103) E5
(MET105) (ALA117) H6
(GLY124) (PRO130) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -158.5° H2
H3 -104.0° -90.1° H3
E4 -32.7° -163.5° 73.8° E4
E5 158.2° 11.0° 96.5° 169.0° E5
H6 10.5° 168.0° -100.1° -26.5° 163.2° H6
E7 167.2° -14.6° 75.8° 149.6° -21.5° 174.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±12.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2nzcd_ : (GLU2) (PRO79) [view usage] : d.58.18.14 |Ferredoxin-like |ACT-like |TM1266-like |automated matches |Thermotoga maritima [TaxId: 243274]
d3hxga_ : (TRP100) (VAL184) [view usage] : d.86.1.0 |eIF4e-like |eIF4e-like |automated matches |automated matches |Blood fluke (Schistosoma mansoni) [TaxId: 6183]
d1q5yb_ : (GLY52) (PRO130) [view usage] : d.58.18.4 |Ferredoxin-like |ACT-like |Nickel responsive regulator NikR, C-terminal domain |Nickel responsive regulator NikR, C-terminal domain |Escherichia coli [TaxId: 562]
d2y3ya_ : (GLU62) (LYS140) [view usage] : d.58.18.0 |Ferredoxin-like |ACT-like |automated matches |automated matches |Helicobacter pylori [TaxId: 563041]
d3phtb_ : (ALA66) (LYS140) [view usage] : d.58.18.0 |Ferredoxin-like |ACT-like |automated matches |automated matches |Helicobacter pylori [TaxId: 210]
d3oq2a_ : (ASP5) (TYR76) [view usage] : d.58.58.0 |Ferredoxin-like |TTP0101/SSO1404-like |automated matches |automated matches |Desulfovibrio vulgaris [TaxId: 882]
d1ap8a_ : (TRP115) (HIS199) [view usage] : d.86.1.1 |eIF4e-like |eIF4e-like |Translation initiation factor eIF4e |Translation initiation factor eIF4e |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3oq2b_ : (ASP5) (TYR76) [view usage] : d.58.58.0 |Ferredoxin-like |TTP0101/SSO1404-like |automated matches |automated matches |Desulfovibrio vulgaris [TaxId: 882]
d4tpwa_ : (TRP113) (HIS200) [view usage] : d.86.1.1 |eIF4e-like |eIF4e-like |Translation initiation factor eIF4e |Translation initiation factor eIF4e |Human (Homo sapiens) [TaxId: 9606]
d1weza_ : (HIS16) (THR91) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Heterogeneous nuclear ribonucleoprotein H' |Human (Homo sapiens) [TaxId: 9606]
d2asya1 : (LEU4) (GLU90) [view usage] : d.58.4.12 |Ferredoxin-like |Dimeric alpha+beta barrel |Hypothetical protein YdhR |Hypothetical protein YdhR |Escherichia coli [TaxId: 562]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.58, d.86