Tableau information
Concept source: d3culb_ amino acid (a.a.) range (HIS405)(TYR481)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EHHEEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(HIS405) (ASN411) E1
(LYS418) (PHE429) H2
(PHE429) (GLY433) H3
(GLY433) (SER443) E4
(ALA450) (LYS455) E5
(VAL457) (GLN468) H6
(PRO476) (TYR481) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 127.2° H2
H3 171.7° -44.5° H3
E4 -38.5° 154.9° 148.7° E4
E5 162.4° -39.1° -11.3° 159.0° E5
H6 22.4° 104.8° 149.3° -59.1° 141.7° H6
E7 150.0° -71.2° -35.2° 114.1° -46.4° -154.2°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3culb_ : (HIS405) (TYR481) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicesomal U1A protein |Human (Homo sapiens) [TaxId: 9606]
d2ru3a_ : (THR35) (LEU109) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d3cuna_ : (HIS305) (TYR381) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicesomal U1A protein |Human (Homo sapiens) [TaxId: 9606]
d2dh8a_ : (GLY10) (ASP76) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2mgzb_ : (LYS36) (LEU109) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |automated matches |Nematode (Caenorhabditis elegans) [TaxId: 6239]
d1oiab_ : (HIS10) (SER91) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicesomal U1A protein |Human (Homo sapiens) [TaxId: 9606]
d2nz4b_ : (HIS10) (TYR86) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicesomal U1A protein |Human (Homo sapiens) [TaxId: 9606]
d1oiaa_ : (HIS10) (TYR86) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicesomal U1A protein |Human (Homo sapiens) [TaxId: 9606]
d2dk2a_ : (LYS16) (LEU83) [view usage] : d.58.7.0 |Ferredoxin-like |RNA-binding domain, RBD |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4pr6a_ : (HIS10) (TYR86) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicesomal U1A protein |Human (Homo sapiens) [TaxId: 9606]
d2cpxa1 : (LYS309) (GLN390) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |RNA-binding protein 41, RBM41 |Human (Homo sapiens) [TaxId: 9606]
d2bw7c_ : (THR1012) (HIS1121) [view usage] : d.58.29.1 |Ferredoxin-like |Nucleotide cyclase |Adenylyl and guanylyl cyclase catalytic domain |automated matches |Spirulina platensis [TaxId: 118562]
d2sxla_ : (THR4) (TYR79) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Sex-lethal protein |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
d3cula_ : (HIS305) (TYR381) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |Splicesomal U1A protein |Human (Homo sapiens) [TaxId: 9606]
d3mr7b_ : (ALA6) (ASN98) [view usage] : d.58.29.0 |Ferredoxin-like |Nucleotide cyclase |automated matches |automated matches |Ruegeria pomeroyi [TaxId: 246200]
d2rq4a_ : (ASN402) (LEU476) [view usage] : d.58.7.1 |Ferredoxin-like |RNA-binding domain, RBD |Canonical RBD |CUG triplet repeat RNA-binding protein 1 |Human (Homo sapiens) [TaxId: 9606]
d3mr7a_ : (ALA6) (ASN98) [view usage] : d.58.29.0 |Ferredoxin-like |Nucleotide cyclase |automated matches |automated matches |Ruegeria pomeroyi [TaxId: 246200]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
d.58