Tableau information
Concept source: d1o6sb_ amino acid (a.a.) range (GLY32)(VAL98)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EHHEEEE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY32) (GLY40) E1
(GLY40) (THR45) H2
(THR45) (VAL50) H3
(VAL50) (GLU54) E4
(GLY58) (GLU64) E5
(ALA72) (SER82) E6
(MET92) (VAL98) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -96.4° H2
H3 120.8° -89.9° H3
E4 -174.8° -81.4° -64.1° E4
E5 -31.6° 78.9° 94.4° 150.8° E5
E6 152.7° -67.8° -82.5° -22.2° 146.5° E6
E7 -53.2° 96.2° 67.6° 131.6° -32.0° 146.4°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3lnea1 : (PHE35) (VAL98) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |E-cadherin (epithelial) |Mouse (Mus musculus) [TaxId: 10090]
d3k6fa_ : (LYS34) (VAL97) [view usage] : b.1.6.0 |Immunoglobulin-like beta-sandwich |Cadherin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2qvfb1 : (LYS33) (VAL98) [view usage] : b.1.6.0 |Immunoglobulin-like beta-sandwich |Cadherin-like |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d2omwb1 : (LYS33) (VAL98) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |E-cadherin (epithelial) |Mouse (Mus musculus) [TaxId: 10090]
d3ff8b_ : (GLY32) (VAL98) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |E-cadherin (epithelial) |Human (Homo sapiens) [TaxId: 9606]
d1suha_ : (PHE35) (THR97) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |E-cadherin (epithelial) |Mouse (Mus musculus) [TaxId: 10090]
d3lnfa1 : (PHE35) (VAL98) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |E-cadherin (epithelial) |Mouse (Mus musculus) [TaxId: 10090]
d3k6da_ : (GLY32) (VAL97) [view usage] : b.1.6.0 |Immunoglobulin-like beta-sandwich |Cadherin-like |automated matches |automated matches |African clawed frog (Xenopus laevis) [TaxId: 8355]
d3k5sa1 : (LYS34) (GLN100) [view usage] : b.1.6.0 |Immunoglobulin-like beta-sandwich |Cadherin-like |automated matches |automated matches |Chicken (Gallus gallus) [TaxId: 9031]
d2omxb_ : (PHE35) (THR99) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |E-cadherin (epithelial) |Human (Homo sapiens) [TaxId: 9606]
d1o6sb_ : (GLY32) (VAL98) [view usage] : b.1.6.1 |Immunoglobulin-like beta-sandwich |Cadherin-like |Cadherin |E-cadherin (epithelial) |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
b.1