Protein Concepts Dictionary

Tableau information

Concept source:  d3oeig_  amino acid (a.a.) range (SER3)(LYS80)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHHEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (SER3)    (ASP7) E1
	    (PRO8)   (ALA19) H2
	   (ARG22)   (ASP38) H3
	   (LYS45)   (GLY51) E4
	   (GLY55)   (ARG60) E5
	   (GLU64)   (ASP73) E6
	   (ASP74)   (LYS80) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2       90.8°   H2                                        
H3      129.4° -137.1°   H3                                 
E4       53.4°  144.2°  -77.7°   E4                          
E5      -85.8°    7.2°  139.9°  139.0°   E5                   
E6      128.7° -137.2°  -26.5°  -76.9°  143.6°   E6            
E7      -27.2°   64.8°  149.6°   79.8°  -59.2°  155.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.0°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4q2ub_ :     (ASP5)   (ARG83)   [view usage] : d.298.1.0 |RelE-like |RelE-like |automated matches |automated matches |Escherichia coli [TaxId: 83333]
 d4mmgb_ :     (GLN3)   (ARG83)   [view usage] : d.298.1.0 |RelE-like |RelE-like |automated matches |automated matches |Escherichia coli [TaxId: 83333]
 d2otra_ :     (THR3)   (ARG82)   [view usage] : d.298.1.0 |RelE-like |RelE-like |automated matches |automated matches |Helicobacter pylori [TaxId: 85962]
 d2a6qe1 :     (LYS2)   (ALA79)   [view usage] : d.298.1.1 |RelE-like |RelE-like |YoeB/Txe-like |Toxin YoeB |Escherichia coli [TaxId: 562]
 d3oeic_ :     (SER3)   (LYS80)   [view usage] : d.298.1.0 |RelE-like |RelE-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d4mmga_ :     (GLN3)   (ARG83)   [view usage] : d.298.1.0 |RelE-like |RelE-like |automated matches |automated matches |Escherichia coli [TaxId: 83333]
 d4mmja_ :     (GLN3)   (ARG83)   [view usage] : d.298.1.0 |RelE-like |RelE-like |automated matches |automated matches |Escherichia coli [TaxId: 469008]
 d1wmia1 :     (ARG4)   (PRO84)   [view usage] : d.298.1.2 |RelE-like |RelE-like |RelE-like |Hypothetical protein PHS013 |Pyrococcus horikoshii [TaxId: 53953]
 d4ml0b_ :     (ASP5)   (ARG83)   [view usage] : d.298.1.0 |RelE-like |RelE-like |automated matches |automated matches |Escherichia coli [TaxId: 413997]
 d3oeig_ :     (SER3)   (LYS80)   [view usage] : d.298.1.0 |RelE-like |RelE-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d4q2ul_ :     (ASP5)   (ARG83)   [view usage] : d.298.1.0 |RelE-like |RelE-like |automated matches |automated matches |Escherichia coli [TaxId: 83333]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.298