Protein Concepts Dictionary

Tableau information

Concept source:  d4i1va_  amino acid (a.a.) range (TYR2)(ASP76)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (TYR2)    (GLY9) E1
	   (GLY13)   (GLY25) H2
	   (SER27)   (THR31) E3
	   (THR31)   (ALA40) H4
	   (MET46)   (THR52) H5
	   (GLY54)   (ALA59) H6
	   (ARG66)   (ASP76) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2      154.9°   H2                                        
E3      -45.8° -152.4°   E3                                 
H4      -82.4°  -99.8°  -56.8°   H4                          
H5      -42.3°  158.9°   -7.9°  -64.6°   H5                   
H6       94.4°  -62.1°  138.4° -116.6°  136.6°   H6            
H7      -77.1°  123.8°   62.7°  111.8°   56.7° -129.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.6°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4ttpa_ :     (TYR9)   (ASN83)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Legionella pneumophila [TaxId: 272624]
 d4i1ub_ :     (TYR2)   (ASP76)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Burkholderia vietnamiensis [TaxId: 269482]
 d4i1ua_ :     (TYR2)   (ASP76)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Burkholderia vietnamiensis [TaxId: 269482]
 d2grja_ :     (MSE1)   (VAL83)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Dephospho-CoA kinase |Thermotoga maritima [TaxId: 2336]
 d1uf9a_ :    (ILE10)   (ASP78)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Dephospho-CoA kinase |Thermus thermophilus [TaxId: 274]
 d2if2a_ :     (ARG3)   (ASP76)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
 d1t3ha_ :     (TYR3)   (ASN77)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Dephospho-CoA kinase |Escherichia coli [TaxId: 562]
 d4i1va_ :     (TYR2)   (ASP76)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Burkholderia vietnamiensis [TaxId: 269482]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37