Tableau information
Concept source: d4ruba1 amino acid (a.a.) range (LEU375)(TRP462)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EHEHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(LEU375) (GLY381) E1
(HIS383) (GLY395) H2
(ASP397) (GLY403) E3
(GLY403) (HIS409) H4
(ASN413) (GLY434) H5
(ASN442) (SER452) H6
(SER452) (TRP462) H7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 154.2° H2
E3 -25.1° 160.3° E3
H4 53.1° -149.8° -47.9° H4
H5 123.2° -43.1° 148.3° 123.4° H5
H6 -73.7° 132.1° -58.1° -27.6° 132.1° H6
H7 57.9° -98.1° 68.8° 111.0° -94.8° -126.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2d69d1 : (HIS339) (GLU418) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Pyrococcus horikoshii [TaxId: 53953]
d1svda1 : (PRO365) (TRP455) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Halothiobacillus neapolitanus [TaxId: 927]
d2zvib2 : (ASN330) (LYS407) [view usage] : c.1.14.0 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d2cwxe1 : (PHE344) (LEU416) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Pyrococcus horikoshii [TaxId: 53953]
d9rubb1 : (THR364) (PHE440) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Rhodospirillum rubrum [TaxId: 1085]
d2d69b1 : (HIS339) (LYS423) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Pyrococcus horikoshii [TaxId: 53953]
d2zvia2 : (ASN330) (GLY409) [view usage] : c.1.14.0 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
d4ruba1 : (LEU375) (TRP462) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Tobacco (Nicotiana tabacum), variant turkish samsun [TaxId: 4097]
d2d69e1 : (HIS339) (LEU416) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Pyrococcus horikoshii [TaxId: 53953]
d1rlda1 : (LEU375) (GLU464) [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Tobacco (Nicotiana tabacum), variant turkish samsun [TaxId: 4097]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1