Protein Concepts Dictionary

Tableau information

Concept source:  d1qf9a_  amino acid (a.a.) range (ASN7)(GLY90)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEHHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ASN7)   (GLY13) E1
	   (GLY18)   (ASP29) H2
	   (TRP32)   (SER36) E3
	   (SER36)   (GLN46) H4
	   (ASP51)   (GLY62) H5
	   (PRO66)   (ASN81) H6
	   (ASN85)   (GLY90) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2      151.6°   H2                                        
E3      -40.3° -159.1°   E3                                 
H4      -87.8° -100.8°   58.4°   H4                          
H5      -50.1°  113.6°  -86.1° -137.3°   H5                   
H6      137.1°  -14.7°  156.3°  101.2° -105.9°   H6            
E7      -24.5° -174.2°  -19.4°  -76.5°   66.7°  160.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1i2da3 :   (GLN395)  (PRO476)   [view usage] : c.37.1.15 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |ATP sulfurylase C-terminal domain |ATP sulfurylase C-terminal domain |Fungus (Penicillium chrysogenum) [TaxId: 5076]
 d3adka_ :     (LYS9)   (GLY94)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Adenylate kinase |Pig (Sus scrofa) [TaxId: 9823]
 d1qf9a_ :     (ASN7)   (GLY90)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |UMP/CMP kinase |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
 d1ki9b_ :     (LEU5)   (THR91)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Adenylate kinase |Methanococcus thermolithotrophicus [TaxId: 2186]
 d1p6xa_ :    (HIS21)  (ASP138)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Thymidine kinase |Equine herpesvirus type 4 [TaxId: 10331]
 d1z83a_ :     (ASN9)   (GLY94)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1p6xb_ :    (HIS21)  (ASP138)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Thymidine kinase |Equine herpesvirus type 4 [TaxId: 10331]
 d1j90b_ :    (THR22)  (GLU104)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Deoxyribonucleoside kinase |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d1ot3a_ :    (THR22)  (GLU104)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Deoxyribonucleoside kinase |Fruit fly (Drosophila melanogaster) [TaxId: 7227]
 d2ukda_ :     (ASN7)   (GLY90)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |UMP/CMP kinase |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
 d4mqbb_ :     (PHE4)   (ASP91)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Staphylococcus aureus [TaxId: 158878]
 d3h86a_ :     (ASN3)   (THR91)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |automated matches |Methanococcus maripaludis [TaxId: 39152]
 d1khtb_ :     (VAL5)   (THR91)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Adenylate kinase |Methanococcus voltae [TaxId: 2188]
 d2bwjf_ :    (CYS11)   (GLY97)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1bifa1 :    (PRO38)  (ALA129)   [view usage] : c.37.1.7 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain |6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3trfb_ :     (ASN7)   (ALA80)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Coxiella burnetii [TaxId: 777]
 d1nksa_ :     (ILE3)   (THR92)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Adenylate kinase |Sulfolobus acidocaldarius [TaxId: 2285]
 d1ukea_ :     (ASN7)   (GLY90)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |UMP/CMP kinase |Slime mold (Dictyostelium discoideum) [TaxId: 44689]
 d1ukya_ :    (SER17)  (GLY104)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Uridylate kinase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1ki9a_ :     (LEU5)   (THR91)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Adenylate kinase |Methanococcus thermolithotrophicus [TaxId: 2186]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37