Protein Concepts Dictionary

Tableau information

Concept source:  d2cwdc_  amino acid (a.a.) range (VAL5)(PRO103)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (VAL5)   (CYS11) E1
	   (ASN14)   (GLU31) H2
	   (PHE38)   (GLY44) E3
	   (ASP55)   (GLY66) H4
	   (THR77)   (ALA83) H5
	   (ASP85)   (MET90) E6
	   (ARG92)  (PRO103) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2      152.3°   H2                                        
E3      -20.3° -171.7°   E3                                 
H4      137.1°  -15.8°  157.3°   H4                          
H5     -138.3°   33.1° -149.4°   31.5°   H5                   
E6      -27.2°  126.0°  -47.2°  110.4° -114.4°   E6            
H7      111.8°  -94.8°   91.7° -110.6° -102.3°  138.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.9°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1p8aa_ :     (LYS5)   (LYS98)   [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Tritrichomonas foetus [TaxId: 5724]
 d2cwdb_ :     (VAL5)  (PRO103)   [view usage] : c.44.1.0 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d1lk0a_ :     (LYS4)   (LEU89)   [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |Arsenate reductase ArsC |Staphylococcus aureus [TaxId: 1280]
 d4etma1 :     (ILE2)  (ALA100)   [view usage] : c.44.1.0 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d1d1pa_ :     (LYS6)  (ILE104)   [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d5pnta_ :     (THR5)  (VAL106)   [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens) [TaxId: 9606]
 d3idoa_ :     (SER0)   (CYS98)   [view usage] : c.44.1.0 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |automated matches |automated matches |Entamoeba histolytica [TaxId: 294381]
 d2wmyc_ :     (ASP7)   (PRO99)   [view usage] : c.44.1.0 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d1rxea_ :     (THR5)   (CYS89)   [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |Arsenate reductase ArsC |Staphylococcus aureus [TaxId: 1280]
 d1d1pb_ :     (LYS6)  (ILE104)   [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2cwdc_ :     (VAL5)  (PRO103)   [view usage] : c.44.1.0 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d2cwda_ :     (VAL5)  (PHE102)   [view usage] : c.44.1.0 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
 d3n8ia_ :     (THR5)  (VAL106)   [view usage] : c.44.1.1 |Phosphotyrosine protein phosphatases I-like |Phosphotyrosine protein phosphatases I |Low-molecular-weight phosphotyrosine protein phosphatases |Tyrosine phosphatase |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.44