Tableau information
Concept source: d4imfa_ amino acid (a.a.) range (GLY6)(GLY99)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EHEHHEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLY6) (ASN16) E1
(GLU23) (LYS38) H2
(ASP40) (GLY45) E3
(GLU50) (LEU54) H4
(SER55) (LYS71) H5
(ALA75) (GLY81) E6
(LEU85) (GLY99) H7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 155.3° H2
E3 -47.0° 149.7° E3
H4 53.7° -148.2° -44.8° H4
H5 122.7° -43.0° 167.2° 124.6° H5
E6 -62.3° 132.4° -17.3° -57.8° -175.0° E6
H7 108.6° -60.9° 148.7° 107.1° -18.6° 164.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.0° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2nxga_ : (PHE1004) (GLU1089) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) |Aquifex aeolicus [TaxId: 63363]
d3sjna2 : (ARG135) (LEU216) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Shewanella pealeana [TaxId: 398579]
d1f5za_ : (GLY6) (GLY99) [view usage] : c.1.10.1 |TIM beta/alpha-barrel |Aldolase |Class I aldolase |N-acetylneuraminate lyase |Haemophilus influenzae [TaxId: 727]
d1q7qa1 : (VAL470) (GLU556) [view usage] : c.1.21.2 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Methyltetrahydrofolate-utiluzing methyltransferases |Cobalamin-dependent methionine synthase MetH, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d1q7ma1 : (VAL470) (GLU556) [view usage] : c.1.21.2 |TIM beta/alpha-barrel |Dihydropteroate synthetase-like |Methyltetrahydrofolate-utiluzing methyltransferases |Cobalamin-dependent methionine synthase MetH, C-terminal domain |Thermotoga maritima [TaxId: 2336]
d3eb2a_ : (GLY7) (GLY99) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
d1tv7a_ : (ARG14) (GLY119) [view usage] : c.1.28.3 |TIM beta/alpha-barrel |Radical SAM enzymes |MoCo biosynthesis proteins |Molybdenum cofactor biosynthesis protein A MoaA |Staphylococcus aureus [TaxId: 1280]
d1eixc_ : (PRO16) (GLY92) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) |Escherichia coli [TaxId: 562]
d1u5va_ : (PRO8) (ALA81) [view usage] : c.1.12.5 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |HpcH/HpaI aldolase |Citrate lyase, beta subunit |Mycobacterium tuberculosis [TaxId: 1773]
d3eb2d_ : (GLY7) (GLY99) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
d2ef9a_ : (PHE4) (GLU89) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |automated matches |Aquifex aeolicus [TaxId: 63363]
d2rfga_ : (GLY4) (GLY95) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Hahella chejuensis [TaxId: 158327]
d1lrqa_ : (PHE1004) (GLU1089) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) |Aquifex aeolicus [TaxId: 63363]
d1jjka_ : (PRO16) (GLY92) [view usage] : c.1.2.3 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Decarboxylase |Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) |Escherichia coli [TaxId: 562]
d2nxii_ : (PHE4) (ALA88) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) |Aquifex aeolicus [TaxId: 63363]
d3eb2b_ : (GLY7) (GLY99) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Rhodopseudomonas palustris [TaxId: 1076]
d2b3xa2 : (VAL238) (GLY324) [view usage] : c.83.1.1 |Aconitase iron-sulfur domain |Aconitase iron-sulfur domain |Aconitase iron-sulfur domain |Iron-responsive element binding protein 1, N-terminal domain |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.83