Protein Concepts Dictionary

Tableau information

Concept source:  d3nkva_  amino acid (a.a.) range (GLY83)(MET173)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY83)   (ASP89) E1
	   (GLN93)  (ARG108) H2
	  (ASN115)  (GLY120) E3
	  (GLY120)  (LEU125) H4
	  (ASP132)  (GLY144) H5
	  (ILE145)  (GLU149) E6
	  (ASN157)  (MET173) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2      159.8°   H2                                        
E3      -12.9°  168.4°   E3                                 
H4      -38.1°  158.9°   25.5°   H4                          
H5      155.2°  -14.6°  168.0° -165.1°   H5                   
E6      -44.9°  145.3°  -32.8°  -18.2°  158.7°   E6            
H7      150.5°  -24.4°  161.6°  160.2°  -10.0°  164.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1jaia_ :    (GLY77)  (GLN165)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |cH-p21 Ras protein |Human (Homo sapiens) [TaxId: 9606]
 d2efcb_ :    (ALA85)  (LEU171)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d2ksqa_ :    (GLU86)  (LEU177)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2eryb_ :    (GLY88)  (PHE178)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4lx0a_ :    (VAL85)  (VAL176)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2hxsa_ :    (GLY88)  (GLY179)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3gj7a_ :    (CYS85)  (GLY170)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Human (Homo sapiens) [TaxId: 9606]
 d1yzka_ :    (VAL85)  (GLN166)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3gj6a_ :    (CYS85)  (LEU168)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Human (Homo sapiens) [TaxId: 9606]
 d2lkca_ :    (THR79)  (LYS175)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
 d4c4pa_ :    (VAL85)  (TYR173)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2f9ma_ :    (VAL85)  (LYS166)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab11b |Human (Homo sapiens) [TaxId: 9606]
 d1a2kc_ :    (CYS85)  (LYS167)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Ran |Dog (Canis familiaris) [TaxId: 9615]
 d1aa9a_ :    (GLY77)  (LYS170)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |cH-p21 Ras protein |Human (Homo sapiens) [TaxId: 9606]
 d3dz8a_ :    (MET96)  (MET187)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1tu4a_ :    (GLN94)  (LEU181)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab5a |Human (Homo sapiens) [TaxId: 9606]
 d4lhxa_ :    (GLY83)  (LYS175)   [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Rab8a |Human (Homo sapiens) [TaxId: 9606]
 d4o2la_ :    (GLY80)  (LYS169)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Mouse (Mus musculus) [TaxId: 10090]
 d3cpha_ :    (GLY95)  (LYS188)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37