Protein Concepts Dictionary

Tableau information

Concept source:  d2tmga1  amino acid (a.a.) range (ASP287)(GLN357)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASP287)  (ALA293) E1
	  (ASN302)  (ILE306) H2
	  (LYS309)  (ALA315) E3
	  (THR320)  (GLY331) H4
	  (ILE332)  (PRO336) E5
	  (PRO336)  (ALA342) H6
	  (ALA342)  (GLN357) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2     -139.3°   H2                                        
E3      -18.5°  120.8°   E3                                 
H4     -171.3°  -33.7° -153.6°   H4                          
E5      -36.9°  104.8°  -21.3° -134.4°   E5                   
H6      -83.1°   60.4°  -66.9°   92.3°   62.4°   H6            
H7      -67.7°  -73.6°  -50.1° -103.9°   31.3°  -45.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±6.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1b3ba1 :   (ASP287)  (LEU356)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Thermotoga maritima [TaxId: 2336]
 d3etea2 :   (ASP320)  (HIS391)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d3k8zc2 :   (ASP296)  (GLN366)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Bacillus subtilis [TaxId: 1423]
 d1c1db1 :   (ASP233)  (LEU295)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Phenylalanine dehydrogenase |Rhodococcus sp., M4 [TaxId: 1831]
 d2tmga1 :   (ASP287)  (GLN357)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Thermotoga maritima [TaxId: 2336]
 d1bvua1 :   (ASP289)  (THR359)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Thermococcus litoralis [TaxId: 2265]
 d3mvqa2 :   (ASP320)  (ASN390)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Cow (Bos taurus) [TaxId: 9913]
 d1bw9b1 :   (ASP633)  (LEU695)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Phenylalanine dehydrogenase |Rhodococcus sp., M4 [TaxId: 1831]
 d1nr1a1 :   (ASP324)  (ASN394)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
 d3mvqf2 :   (ASP320)  (ASN390)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Cow (Bos taurus) [TaxId: 9913]
 d1l1fa1 :   (ASP324)  (ARG423)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Human (Homo sapiens) [TaxId: 9606]
 d1bxga1 :   (ASP233)  (LEU295)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Phenylalanine dehydrogenase |Rhodococcus sp., M4 [TaxId: 1831]
 d1hwya1 :   (ASP320)  (HIS391)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Cow (Bos taurus) [TaxId: 9913]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2