Tableau information
Concept source: d4jeqa_ amino acid (a.a.) range (VAL61)(LEU154)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL61) (GLN65) E1
(LEU80) (GLY87) H2
(ASN89) (LEU93) E3
(THR105) (GLY120) H4
(MET122) (GLY128) E5
(LEU131) (GLY137) H6
(ARG138) (LEU154) H7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 159.6° H2
E3 -33.8° 149.5° E3
H4 151.2° -31.8° -170.6° H4
E5 -43.6° 137.7° -11.7° -164.9° E5
H6 86.1° -111.6° 59.5° -111.2° 58.3° H6
H7 112.4° -69.8° 140.7° -39.7° 152.4° 116.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±11.6° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1e1cb1 : (THR279) (ASN391) [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase beta subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
d2c91b_ : (ASP104) (GLU178) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1uf3c_ : (TYR7) (HIS91) [view usage] : d.159.1.6 |Metallo-dependent phosphatases |Metallo-dependent phosphatases |TT1561-like |Hypothetical protein TT1561 |Thermus thermophilus [TaxId: 274]
d2reqa1 : (ARG283) (GLN392) [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase alpha subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
d1amka_ : (GLU65) (LEU154) [view usage] : c.1.1.1 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |Triosephosphate isomerase (TIM) |Triosephosphate isomerase |Trypanosome (Leishmania mexicana) [TaxId: 5665]
d3qzea_ : (ILE158) (LEU217) [view usage] : c.1.10.0 |TIM beta/alpha-barrel |Aldolase |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
d2iw0a1 : (GLY42) (ILE133) [view usage] : c.6.2.3 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |NodB-like polysaccharide deacetylase |Chitin deacetylase |Bean anthracnose fungus (Colletotrichum lindemuthianum) [TaxId: 290576]
d1kood_ : (LEU268) (PRO346) [view usage] : c.10.2.3 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |mRNA export factor tap |mRNA export factor tap |Human (Homo sapiens) [TaxId: 9606]
d1bhga3 : (VAL348) (ASP437) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |beta-Glucuronidase, domain 3 |Human (Homo sapiens) [TaxId: 9606]
d4qeca_ : (ASN53) (PHE171) [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Staphylococcus epidermidis [TaxId: 1282]
d2plfa3 : (ARG88) (LYS171) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |Initiation factor eIF2 gamma subunit, N-terminal (G) domain |Sulfolobus solfataricus [TaxId: 2287]
d1kohd_ : (LEU268) (PHE345) [view usage] : c.10.2.3 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |mRNA export factor tap |mRNA export factor tap |Human (Homo sapiens) [TaxId: 9606]
d2bv9a1 : (GLY8) (GLY99) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Endoglucanase H N-terminal domain |Clostridium thermocellum [TaxId: 1515]
d4jeqa_ : (VAL61) (LEU154) [view usage] : c.1.1.0 |TIM beta/alpha-barrel |Triosephosphate isomerase (TIM) |automated matches |automated matches |Trypanosoma cruzi [TaxId: 5693]
d2ckdb_ : (ASP154) (HIS269) [view usage] : c.66.1.57 |S-adenosyl-L-methionine-dependent methyltransferases |S-adenosyl-L-methionine-dependent methyltransferases |ML2640-like |automated matches |Mycobacterium leprae [TaxId: 1769]
d3sbxa_ : (TRP11) (LEU81) [view usage] : c.129.1.0 |MCP/YpsA-like |MCP/YpsA-like |automated matches |automated matches |Mycobacterium marinum [TaxId: 216594]
d4f2da1 : (LYS47) (ARG141) [view usage] : c.85.1.2 |FucI/AraA N-terminal and middle domains |FucI/AraA N-terminal and middle domains |AraA N-terminal and middle domain-like |automated matches |Escherichia coli K-12 [TaxId: 83333]
d1reqd1 : (THR279) (ASN391) [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase beta subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
d1ghsa_ : (ILE1) (VAL77) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Plant beta-glucanases |Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]
d1i41a_ : (ILE179) (GLY251) [view usage] : c.67.1.3 |PLP-dependent transferase-like |PLP-dependent transferases |Cystathionine synthase-like |Cystathionine gamma-synthase, CGS |Tobacco (Nicotiana tabacum) [TaxId: 4097]
d2cyga1 : (ILE29) (VAL105) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Plant beta-glucanases |Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]
d3sjza1 : (ARG88) (LYS171) [view usage] : c.37.1.8 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |G proteins |automated matches |Sulfolobus solfataricus [TaxId: 273057]
d1aq0a_ : (ILE1) (PRO81) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Plant beta-glucanases |Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]
d2ixta_ : (ASP98) (ALA186) [view usage] : c.41.1.1 |Subtilisin-like |Subtilisin-like |Subtilases |automated matches |Bacillus sphaericus [TaxId: 1421]
d2vyoa_ : (ARG123) (GLY206) [view usage] : c.6.2.0 |7-stranded beta/alpha barrel |Glycoside hydrolase/deacetylase |automated matches |automated matches |Encephalitozoon cuniculi [TaxId: 284813]
d3meba_ : (TYR152) (PHE236) [view usage] : c.67.1.0 |PLP-dependent transferase-like |PLP-dependent transferases |automated matches |automated matches |Giardia lamblia [TaxId: 184922]
d3reqb1 : (THR279) (ASN391) [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase beta subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.10, c.67, c.2, d.159, c.6, c.66, c.37, c.85, c.41, c.129