Protein Concepts Dictionary

Tableau information

Concept source:  d3a1nb_  amino acid (a.a.) range (ALA238)(LEU309)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA238)  (THR242) E1
	  (THR242)  (GLU252) H2
	  (GLU256)  (PHE265) E3
	  (PHE265)  (ALA271) H4
	  (GLU275)  (SER280) E5
	  (SER280)  (TRP286) H6
	  (ASP293)  (LEU309) H7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2       99.4°   H2                                        
E3      -86.2°  164.1°   E3                                 
H4     -128.9°  106.8°  -80.3°   H4                          
E5     -167.3°   85.1°   92.7°   38.7°   E5                   
H6      165.8°  -72.2°   99.1°   65.3°  -26.6°   H6            
H7      -77.0°  -65.4°  101.9°  154.0°  115.5°   88.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3a9wb_ :   (GLY233)  (LEU309)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermoplasma volcanium [TaxId: 50339]
 d3wmxb_ :   (GLY245)  (LYS313)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Ralstonia eutropha [TaxId: 381666]
 d3wmxa_ :   (GLY245)  (LYS313)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Ralstonia eutropha [TaxId: 381666]
 d3ajrb_ :   (ALA238)  (LYS308)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermoplasma volcanium [TaxId: 273116]
 d3a1nb_ :   (ALA238)  (LEU309)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermoplasma volcanium [TaxId: 50339]
 d3a4vb_ :   (ALA238)  (LYS308)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thermoplasma volcanium [TaxId: 50339]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2