Tableau information
Concept source: d1s2ub_ amino acid (a.a.) range (VAL80)(LYS192)
nSSEs in this Concept: 7
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL80) (ALA86) E1
(ALA96) (GLY107) H2
(ALA109) (ASP115) E3
(ASP134) (LYS146) H4
(PHE154) (VAL160) E5
(LEU169) (GLY183) H6
(ALA186) (LYS192) E7
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 160.6° H2
E3 -24.0° 158.3° E3
H4 145.4° -34.0° 167.5° H4
E5 -44.2° 134.1° -24.2° 168.0° E5
H6 121.3° -63.0° 138.7° -29.2° 162.7° H6
E7 -57.7° 110.5° -50.0° 138.8° -32.1° 157.9°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.4° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d3qr3a_ : (PHE177) (GLY293) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Hypocrea jecorina [TaxId: 51453]
d2j6xc_ : (PRO88) (ALA173) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Aerococcus viridans [TaxId: 1377]
d1g7va_ : (ASP110) (VAL200) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |3-deoxy-D-manno-octulosonate 8-phosphate synthase (KDO8P synthase) |Escherichia coli [TaxId: 562]
d3o6ca_ : (LEU2) (PRO91) [view usage] : c.1.24.0 |TIM beta/alpha-barrel |Pyridoxine 5'-phosphate synthase |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]
d3ngfa_ : (ARG3) (MET105) [view usage] : c.1.15.0 |TIM beta/alpha-barrel |Xylose isomerase-like |automated matches |automated matches |Brucella melitensis [TaxId: 359391]
d3tmqa_ : (VAL88) (GLU165) [view usage] : c.1.10.4 |TIM beta/alpha-barrel |Aldolase |Class I DAHP synthetase |automated matches |Burkholderia pseudomallei [TaxId: 320372]
d3fa3b_ : (VAL158) (PHE241) [view usage] : c.1.12.0 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |automated matches |automated matches |Aspergillus niger [TaxId: 5061]
d1xp3a1 : (LEU2) (HIS111) [view usage] : c.1.15.1 |TIM beta/alpha-barrel |Xylose isomerase-like |Endonuclease IV |Endonuclease IV |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
d1p4ca_ : (PRO74) (ASP158) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |Membrane-associated (S)-mandelate dehydrogenase |Pseudomonas putida [TaxId: 303]
d2oqya2 : (PRO242) (GLY325) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Oceanobacillus iheyensis [TaxId: 182710]
d1bf6a_ : (ARG153) (ARG246) [view usage] : c.1.9.3 |TIM beta/alpha-barrel |Metallo-dependent hydrolases |Phosphotriesterase-like |Phosphotriesterase homology protein |Escherichia coli [TaxId: 562]
d1piia1 : (GLY255) (GLY335) [view usage] : c.1.2.4 |TIM beta/alpha-barrel |Ribulose-phoshate binding barrel |Tryptophan biosynthesis enzymes |N-(5'phosphoribosyl)antranilate isomerase, PRAI |Escherichia coli [TaxId: 562]
d2q02b_ : (ARG7) (PRO105) [view usage] : c.1.15.4 |TIM beta/alpha-barrel |Xylose isomerase-like |IolI-like |Putative cytoplasmic protein STM4435 |Salmonella typhimurium [TaxId: 90371]
d2vi0a_ : (ASN149) (GLU258) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Clostridium thermocellum [TaxId: 1515]
d2pgwa2 : (PRO243) (TRP328) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Sinorhizobium meliloti [TaxId: 266834]
d1ur0b_ : (ASN196) (GLU321) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Beta-1,4-galactanase |Bacillus licheniformis [TaxId: 1402]
d1vjza_ : (ARG9) (LEU136) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |Endoglucanase homologue TM1752 |Thermotoga maritima [TaxId: 2336]
d2uy3a_ : (GLY151) (PRO249) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d1f61a_ : (ALA148) (MET284) [view usage] : c.1.12.7 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |Phosphoenolpyruvate mutase/Isocitrate lyase-like |Isocitrate lyase |Mycobacterium tuberculosis [TaxId: 1773]
d3apya_ : (PHE15) (ARG107) [view usage] : c.1.23.1 |TIM beta/alpha-barrel |FAD-linked oxidoreductase |Methylenetetrahydrofolate reductase |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
d1k77a_ : (ARG3) (MSE105) [view usage] : c.1.15.5 |TIM beta/alpha-barrel |Xylose isomerase-like |Hypothetical protein YgbM (EC1530) |Hypothetical protein YgbM (EC1530) |Escherichia coli [TaxId: 562]
d2gjpa2 : (ASP231) (VAL329) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |automated matches |Bacillus halmapalus [TaxId: 79882]
d3aala_ : (LEU2) (HIS110) [view usage] : c.1.15.1 |TIM beta/alpha-barrel |Xylose isomerase-like |Endonuclease IV |automated matches |Geobacillus kaustophilus [TaxId: 1462]
d2e77b_ : (PRO1088) (ALA1173) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Aerococcus viridans [TaxId: 1377]
d1cb7b_ : (ILE211) (THR327) [view usage] : c.1.19.2 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Glutamate mutase, large subunit |Glutamate mutase, large subunit |Clostridium cochlearium [TaxId: 1494]
d1zsxa_ : (ASP139) (SER230) [view usage] : c.1.7.1 |TIM beta/alpha-barrel |NAD(P)-linked oxidoreductase |Aldo-keto reductases (NADP) |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2j6xb_ : (PRO88) (ALA173) [view usage] : c.1.4.0 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |automated matches |automated matches |Aerococcus viridans [TaxId: 1377]
d1u5ha_ : (PRO8) (LYS92) [view usage] : c.1.12.5 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |HpcH/HpaI aldolase |Citrate lyase, beta subunit |Mycobacterium tuberculosis [TaxId: 1773]
d3lx9a1 : (LEU89) (SER203) [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |Melibiase |Human (Homo sapiens) [TaxId: 9606]
d2afig_ : (ASP120) (ASN215) [view usage] : c.37.1.10 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nitrogenase iron protein-like |Nitrogenase iron protein |Azotobacter vinelandii [TaxId: 354]
d2a7na_ : (PRO74) (ASP158) [view usage] : c.1.4.1 |TIM beta/alpha-barrel |FMN-linked oxidoreductases |FMN-linked oxidoreductases |automated matches |Pseudomonas putida [TaxId: 303]
d2waga_ : (ILE16) (GLU107) [view usage] : c.1.8.0 |TIM beta/alpha-barrel |(Trans)glycosidases |automated matches |automated matches |Bacillus anthracis [TaxId: 198094]
d4hgxb_ : (PHE9) (PRO106) [view usage] : c.1.15.4 |TIM beta/alpha-barrel |Xylose isomerase-like |IolI-like |Putative cytoplasmic protein STM4435 |Salmonella typhimurium [TaxId: 90371]
d3rita2 : (ARG237) (ASP321) [view usage] : c.1.11.0 |TIM beta/alpha-barrel |Enolase C-terminal domain-like |automated matches |automated matches |Methylococcus capsulatus [TaxId: 414]
d2bvda_ : (ASN149) (GLU258) [view usage] : c.1.8.3 |TIM beta/alpha-barrel |(Trans)glycosidases |beta-glycanases |automated matches |Clostridium thermocellum [TaxId: 1515]
d1x1oa2 : (LYS198) (ALA269) [view usage] : c.1.17.0 |TIM beta/alpha-barrel |Nicotinate/Quinolinate PRTase C-terminal domain-like |automated matches |automated matches |Thermus thermophilus HB8 [TaxId: 300852]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.1, c.37