Protein Concepts Dictionary

Tableau information

Concept source:  d1ltkc_  amino acid (a.a.) range (LYS18)(LEU118)

nSSEs in this Concept: 7

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (LYS18)   (VAL27) E1
	   (ASN38)   (GLY54) H2
	   (LYS57)   (HIS63) E3
	   (ASN72)   (GLY89) H4
	   (GLU90)   (ASN96) E5
	  (GLY100)  (ALA110) H6
	  (SER114)  (LEU118) E7

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                               
H2     -167.5°   H2                                        
E3      -34.9°  157.3°   E3                                 
H4      113.5°  -54.5°  143.4°   H4                          
E5      -81.7°  110.3°  -51.2°  164.7°   E5                   
H6      104.6°  -63.0°  137.6°  -12.1°  168.4°   H6            
E7      -57.4°  135.0°  -24.5°  166.6°  -26.8°  161.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.7°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3oz7b_ :    (LYS17)  (GLU119)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d2ie8a_ :    (LYS12)  (GLU112)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |Thermus caldophilus [TaxId: 272]
 d1v6sa_ :    (ARG13)  (LEU110)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Thermus thermophilus [TaxId: 274]
 d1vpea_ :    (ARG15)  (GLU115)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Thermotoga maritima [TaxId: 2336]
 d1phpa_ :    (ARG15)  (GLU115)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Bacillus stearothermophilus [TaxId: 1422]
 d1ltkb_ :    (LYS17)  (GLU119)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d1qpga_ :    (ARG17)  (ASN119)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1ltkc_ :    (LYS18)  (LEU118)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d3oz7a_ :    (LYS18)  (GLU119)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d3pgka_ :    (LYS16)  (LEU116)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1ltka_ :    (LYS17)  (GLU119)   [view usage] : c.86.1.1 |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Phosphoglycerate kinase |Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
 d3q3va_ :    (LYS16)  (LEU115)   [view usage] : c.86.1.0 |Phosphoglycerate kinase |Phosphoglycerate kinase |automated matches |automated matches |Campylobacter jejuni [TaxId: 192222]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.86